Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3749 ATGGGAATTCAGAAATATATGGTTGTCTTAAAGTTTAGTTTTTGTGTTCTTTTAGTTCTGCATCTAGTAGCAGCAGTTAGCGTTATAGAAAAGAAGGAAATACAAGAAGATGGTTTTATTAGAGACCTATTTGATTCAGCATCTGAATTGTTAGATGAGCATACGGCAAAGGTATTAAGGACCGCCTGCTGTGAAGATTTTATTCATTTAAAGAAAGTGGTATATCGTGATTTATGCCTCCCACTGGAATTGTTTGCTAGCACCAACAAACTCAGTTCAACAATTCAACCATTTGCACAAGCAGACATCCAAAAATTGCTTAATGGTTGCCATCCTCAAATCAAGGAAAACTTTCTTCATTGTTTGAGAAAAAATAATCTTCTATTATCTGTCTCAGGAGAAGACAATGATTCCAAGAAATGGCATGTCACGAATACGGGATATCTTTTTTCCACATCCAGTATTCCTAGAAGAAATCTGGTCCGTGTTTTGCTCCAGCACATATCAGAACCACCTAGTTCAGACCCCGCAGTTGGATCACCTACACTGAGTCTCACTCCATCACCTGAGCCCATTCTCGCTCCATCGTCTGAACCCAGTCTATCTCCATCACCTGCTCCAGTGCCTCTACTTCCTAAGCCGCCATCTCCTTCTTTCTCACCAACCCCATTTTTCCCGAAGCTTACACCACCAGCAGCTGCTGATATTTCTGCTCCTCCATCTTCTGACACGAACGGGAAGGATGATAAGCATAGTACAAAAAGAACAGTTGTTCTTTCTGTAGTTATAACTATATCGGTGATATTTATAGCTGCAGCACTGTTCTTTTTATGCCTTCGTAAGACTCGCCGGCTTAGACAAAATGATGAGAGGCCACTTCTGAGCTTGAGCATGAATGACTATTCTTTTGGTCCTTCCAATCATGCTTTTGGAAATTCGACAAAAGGGGAGAAACATGGGTTTCAGTCATCAAGTGATAATTTAGGAGACAACAAGAAGACCTCGGTGCAAGAACATCAATCAATAGGAGCTCATACTGCTGCTGGATTACCATTTGAATTGACACCTCCTCTTGGAAGAGTGGGAACTATCCATTCTGGAATGCCACCTTTAAGACCTCCTCCAGGAAGAATGAATCCTCTCCCCCCTGAGCCACCTTCATTTAGGCCTTCTAGTAATAATGCCGTATCTACTGCTGCTGCAACTCCTCCTCCTCGACAATCTGGTGTTGGCAGTGCTCGACCTCCTACTACTCCTTCCCCACATTCAACACTAGCCGGTGCCAAACCTGCTGCTCTTCGTCCTCCGCTACCCCCTGCTCTGTCTGGTGCCAAACCTAGTCCTCCACCACCCCTTGCTCCGCCTGGTGCCAAACCTAGTCCTCCACCACCCCCTGCACCACCTGGTGCCAAACCTGGTCCTCCCCCCCCTCCACCACCAGCACCACATGGTGCTAAACCTGGTCCTCGTCCACCTCCTCCTCCTCCTAAGAGTGGTGTAGCTCCTCCTCGTCCTCCAGTTGGCCCAAAGGTTGGTGGACTAAAAGCTACAGCGATTGCTGAAGCAGGTGCAGAAGGTGGAGCTGATACTTCCAAAGCCAAACTAAAGCCATTTTTCTGGGATAAGGTTCAAGCTAATTCTGATCAATCAATGGTTTGGAATCAGATCAAATCAGGATCGTTCCAGTTTAACGAAGAGATGATAGAGACACTTTTTGGTTATAATGCTGTAAATAATGGTCAGCGACAAAAGGAGTCTTCCTCCTCCCAAGATCCTTCACCTCAGTATATCCAGATCGTTGACAAAAAGAAATCACAAAATTTATTAATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTTGTGATGCACTCTATGAAGGAAATGAGCTACCGTCGGAGTTCCTTCAAACCTTGTTGAAGATGGCGCCAACATCAGACGAAGAACTTAAGCTTAGACTTTTTAGTGGTAATCTGTCTCAACTTGGGCCTGCTGACCGTTTCCTGAAATCCATGGTTGACATTCCCTTTGCCTTTAAGCGAATGGAAGTACTGCTTTTTATGTGTACATTTAAAGAGGAGCTCACTACTACTATGGAGTCTTTTGCAGTTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGGCTGTTTCACAAGCTTCTCGAAGCCGTTCTCAAAACTGGAAACCGTATGAACGACGGAACATACCGTGGTGGTGCACAAGCATTTAAACTTGATACGCTTTTGAAATTATCCGATGTAAAAGGAACAGATGGCAAGACTACACTCTTACACTTTGTAGTTCAAGAGATTATCCGCTCGGAGGGCATAAAAGCTGCCCGAGCGGAAAAAGAGAGCCAGGGTTTGTCCAATATTAAAACGGACGAGGCTGTTGAAGATAACACACGTGAAATAGAAGACCACTACCGCGAACTTGGTCTTGAGATGGTATCGCACTTGAGCAGTGAGCTCGAGAATGTTAAGAGAGGTTCTGTTCTAGATGCGGACAGCTTAACAGCTACGGCTACCAAACTTGGCCACGGTCTCGTGAAAGCCAAAGACCTACTGAACAAAAACCTGAAGAATGTGGAAGATGATAGAGGGTTTCGTGAGACATTGGAAAGTTTTCTCCAAAATGCTGAGGCTGATGTTAAGAAACTGCTGGAAGATGAGAAGAAAATCATGGCTCTGGTGAAGAGCACGGGCGATTACTTTCACGGGAATGCAACGAAGGACGATGGCTTGCGATTATTTGTAATAGTAAGAGACTTCTTACTAATGGTGGATAAGGTATGCAAGGAGGTGAGAGATGCACAGAAGAAGTCATCAAAACCTGTAAAACAAGAAACTTCAAGAGGATCGTCTTCATCTGATACACGTCCACCACCTTCTGATTTTCGTCAGCGGCTTTTTCCGGCTATCACTGAAAGGAGGATAGATGACATTAGTTCAGATGATGAGAGTCCATAG 2976 0.4435 MGIQKYMVVLKFSFCVLLVLHLVAAVSVIEKKEIQEDGFIRDLFDSASELLDEHTAKVLRTACCEDFIHLKKVVYRDLCLPLELFASTNKLSSTIQPFAQADIQKLLNGCHPQIKENFLHCLRKNNLLLSVSGEDNDSKKWHVTNTGYLFSTSSIPRRNLVRVLLQHISEPPSSDPAVGSPTLSLTPSPEPILAPSSEPSLSPSPAPVPLLPKPPSPSFSPTPFFPKLTPPAAADISAPPSSDTNGKDDKHSTKRTVVLSVVITISVIFIAAALFFLCLRKTRRLRQNDERPLLSLSMNDYSFGPSNHAFGNSTKGEKHGFQSSSDNLGDNKKTSVQEHQSIGAHTAAGLPFELTPPLGRVGTIHSGMPPLRPPPGRMNPLPPEPPSFRPSSNNAVSTAAATPPPRQSGVGSARPPTTPSPHSTLAGAKPAALRPPLPPALSGAKPSPPPPLAPPGAKPSPPPPPAPPGAKPGPPPPPPPAPHGAKPGPRPPPPPPKSGVAPPRPPVGPKVGGLKATAIAEAGAEGGADTSKAKLKPFFWDKVQANSDQSMVWNQIKSGSFQFNEEMIETLFGYNAVNNGQRQKESSSSQDPSPQYIQIVDKKKSQNLLILLRALNVTMEEVCDALYEGNELPSEFLQTLLKMAPTSDEELKLRLFSGNLSQLGPADRFLKSMVDIPFAFKRMEVLLFMCTFKEELTTTMESFAVLEVACKELRNSRLFHKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARAEKESQGLSNIKTDEAVEDNTREIEDHYRELGLEMVSHLSSELENVKRGSVLDADSLTATATKLGHGLVKAKDLLNKNLKNVEDDRGFRETLESFLQNAEADVKKLLEDEKKIMALVKSTGDYFHGNATKDDGLRLFVIVRDFLLMVDKVCKEVRDAQKKSSKPVKQETSRGSSSSDTRPPPSDFRQRLFPAITERRIDDISSDDESP* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3749 991 Pfam Formin Homology 2 Domain 529 930 IPR015425 -
Tpr2g3749 991 MobiDBLite consensus disorder prediction 171 206 - -
Tpr2g3749 991 MobiDBLite consensus disorder prediction 390 424 - -
Tpr2g3749 991 MobiDBLite consensus disorder prediction 388 502 - -
Tpr2g3749 991 MobiDBLite consensus disorder prediction 973 991 - -
Tpr2g3749 991 SMART it6_source 525 945 IPR015425 -
Tpr2g3749 991 Gene3D Formin, FH2 domain 531 961 IPR042201 -
Tpr2g3749 991 ProSiteProfiles Formin homology-2 (FH2) domain profile. 525 956 IPR015425 -
Tpr2g3749 991 MobiDBLite consensus disorder prediction 192 206 - -
Tpr2g3749 991 MobiDBLite consensus disorder prediction 173 191 - -
Tpr2g3749 991 MobiDBLite consensus disorder prediction 432 502 - -
Tpr2g3749 991 PANTHER FORMIN-LIKE PROTEIN 1 989 - -
Tpr2g3749 991 MobiDBLite consensus disorder prediction 950 965 - -
Tpr2g3749 991 Coils Coil 872 899 - -
Tpr2g3749 991 SUPERFAMILY Formin homology 2 domain (FH2 domain) 594 954 - -
Tpr2g3749 991 PANTHER FORMIN-RELATED 1 989 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tpr2g3749 991 MobiDBLite consensus disorder prediction 939 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3749 Tpr-Chr2 40493172 40499716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3749 478 982 FH2 protein (formin) Gene Family AT5G54650 62.795 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3749 - - gmx:100793413 713.375