Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3748 ATGCCAACAGTGTGGTTTTCTTTGAAGAAGTCACTACATTGCAAATCAGAACCATCAGATGTACATGATCCACAAACAAGGAAACATTTGAGTACAATCTTAACAAAAAGAGGAGGAGGAGGAGGAGGTAGATCAGGTTGTTCAAGGTCAATAGCAAATCTAAAAGATGTTATTCATGGAAGCAAAAGACATATTGAAAAGCCACCAAGTTGTAGTCCAAGATCTATAGGTAGCAGTGAGTTTCTAAACCCAATAACTCATGAAGTTATTTTGAGTAACTCAAGGTGTGAGTTAAAAATCACTGGATTTCAAGAAGGTATTGGAAACAATGCTAGTGGTGGTAGTAGTAGTAGTAGTGGTGGTGGTGGTTCTTCAACTTTTGTTGGTACTTTAAGACCTGGTACACCTGGTCCTGGAGGACACCCTACAATGCATTACTTTAACCCTTCTTTTAGGACTTCTTCAACTCCTCCAAGGAAATCTCCTTTTCTTTTGTCAGAAGGGTCTGGTTTTCATGGTGCTACTGCTGCTGGTGTTCATTCAAGTAATAGGATGTCCCTTGAGACAGATTCTAATGGTTCTTCAACTGTTACTTGTCACAAATGTGGTGAACACTTTAACAAATGGGAAGCTGCTGAAGCTCACCATCTCTCCAAACATGCTGTTACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATAATATGCAGGACAAGTTGGTTAAAGTCAGAAAACAACTGTGGTAGAATTGAAAGAGTTTTGAAGGTACACAACATGCAAAAAACTTTAGCTAGATTTGAAGAATACAGGGAAATGGTGAAAATCAAAGCAAGCAAACTCCAGAAGAAGCATCCTAGGTGTCTTGCTGATGGGAATGAACTTTTAAGGTTCTATGGAACCACTGTTTCTTGTTCTCTTGGTCTCAATGGTTCTTCAAGCCTATGCCTATCAGAAAAATGTTGTGTTTGTAGAATTATTAGGAGTGGTTTTTCTGCTAAGAAGGAGTTGAAAGGTGGCATAGGTGTTTTCACAACATCTACAAGTGGAAGAGCTTTTGAATCTATAGAGATTTTAGATAATGAACCATCATTAAGAAAAGCATTGATAGTATGCAGAGTAATTGCTGGTAGGGTTCATAGGCCACTTGAGAACATTCAAGAAATGGCAGCACAAACTGGATTTGATTCATTGGCTGGAAAAGTAGGTCTGTATTCAAATATTGAGGAGCTTTATTTGCTTAATCCTAGAGCTCTTCTTCCTTGTTTTGTGGTAATTTGCAAACCATGA 1296 0.3843 MPTVWFSLKKSLHCKSEPSDVHDPQTRKHLSTILTKRGGGGGGRSGCSRSIANLKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGIGNNASGGSSSSSGGGGSSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSGFHGATAAGVHSSNRMSLETDSNGSSTVTCHKCGEHFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVSCSLGLNGSSSLCLSEKCCVCRIIRSGFSAKKELKGGIGVFTTSTSGRAFESIEILDNEPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3748 431 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 431 - -
Tpr2g3748 431 SUPERFAMILY ADP-ribosylation 222 430 - -
Tpr2g3748 431 ProSitePatterns Zinc finger C2H2 type domain signature. 199 220 IPR013087 -
Tpr2g3748 431 Gene3D - 212 430 - -
Tpr2g3748 431 PANTHER - 2 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3748 Tpr-Chr2 40482974 40485717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3748 1 431 C2H2 Transcription Factor Family AT5G54630 68.951 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr2g3748 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3748 - - lang:109355134 749.969