Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3742 ATGTTTCAGTCTCTATTACAAAAAAAGCAAATGGATCAGCAAAACCAAAGTATGCGTTTGGTTCTTTCTACTGATGCTAAGCCTAGGCTGAAATGGACTCATGAACTTCACCAAAGATTTGCTGAAGCAATTAACCAGCTTGGAGGTGCAGAAAAGGCAACACCAAAGAGTCTTATGAGGGCTATGGGGATTCCAGGACTCACTTTATACCATCTAAAGAGCCACTTACAGAAATATAGACTTGGCAAAAGCCAACAGGTAGAAACATGTTCTGACAACAAACAAGATTACATAGAAATCCAAAGCACTGGAAGTCAATGCAGCAGAGAAATTAGTGTTGGAAACCAGAATCAAACCACTGAAAGCTTGAAGATTTCTGAGGCTCTCCAAATACAAATGGAAGTACAAAAGAAACTTTATGAACAAATTGAGGTGCAGAAACATTTACAGTTTAGAATTGAAGCTCAAGGAAAGTACTTACAATCGGTACTAATGAAGGCGCAAGAAGCACTTGCAGGACACGGTTCTTGTTCGACAACAGGTGTAGAACATGCTAATAAAGATGAACTACTTTCTCAGTTATTATCAATAATCAACAATGCATGTCCTAGTTCTCCCATTTCAGAACTAACAGAAACAAGAGGTTTAAGTTTAAACTTTGGTGAGAAGAAACAAAATAGAGGAACTATGTGTTCTCTAGAAAGTTCTCTTACATCATCTGAAAGCTCTGAGAGAAAAGAGGAAAATCAAACCATAGATGAGGCAGAGAACACTTCAAATTATAATAGTATTTCAGTTGAATTGCCACTAATTTCCATTGTAACAGAAAGTAAAACATTCAAGACTGATACAAATGATGAAGCTAGTGGGAAAAAGAGAAGTGCAACTACTGATTTTGATGGTGGTTGTGTTGATCAATCAGATGGAAAAAGATGTGGCAAAAAATTGAGGAAATCTGAGTTGTCACAAATGCTTGACTTGAACATAAAATATGAGAGAGACGTTGACTTAAGTTCCACAGAAATAGATTTAAATTGTAGTTCAAGCTTTTGA 1053 0.3637 MFQSLLQKKQMDQQNQSMRLVLSTDAKPRLKWTHELHQRFAEAINQLGGAEKATPKSLMRAMGIPGLTLYHLKSHLQKYRLGKSQQVETCSDNKQDYIEIQSTGSQCSREISVGNQNQTTESLKISEALQIQMEVQKKLYEQIEVQKHLQFRIEAQGKYLQSVLMKAQEALAGHGSCSTTGVEHANKDELLSQLLSIINNACPSSPISELTETRGLSLNFGEKKQNRGTMCSLESSLTSSESSERKEENQTIDEAENTSNYNSISVELPLISIVTESKTFKTDTNDEASGKKRSATTDFDGGCVDQSDGKRCGKKLRKSELSQMLDLNIKYERDVDLSSTEIDLNCSSSF* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3742 350 MobiDBLite consensus disorder prediction 227 258 - -
Tpr2g3742 350 Pfam MYB-CC type transfactor, LHEQLE motif 124 169 IPR025756 -
Tpr2g3742 350 Pfam Myb-like DNA-binding domain 29 80 IPR001005 -
Tpr2g3742 350 SUPERFAMILY Homeodomain-like 26 82 IPR009057 -
Tpr2g3742 350 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 27 82 IPR006447 GO:0003677
Tpr2g3742 350 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 350 IPR044848 GO:0003700
Tpr2g3742 350 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 12 350 - -
Tpr2g3742 350 Gene3D - 26 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3742 Tpr-Chr2 40446020 40447967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3742 11 311 G2-like Transcription Factor Family AT1G69580 48.408 3.56e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr2g3742 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3742 - - gmx:100805252 438.728