Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3736 ATGTGTCACATTATCAGAAGAAGAAACCATAACCAAACTCTCTTCTGTAATCAATTAATGGAGACTAATACAAGCTCTGAACTCCCTCCTGGCTTTAGATTTCACCCAACAGATGAAGAACTAATTGTGCATTACCTTTGTAATCAAGCCACTTCAAAGCCTTGCCCTGCATCTATCATTCCAGAAGTTGATATCTATAAATTTGATCCATGGGAATTGCCTGATAAATCTGAGTTTGGAGAGAATGAATGGTATTTCTTTAGCCCAAGAGAAAGAAAGTACCCAAATGGGGTGAGGCCTAACAGAGCAACTTTATCTGGATATTGGAAAGCTACTGGCACAGACAAGGCAATCAATAGTGGATCAAAGCAAATTGGGGTGAAGAAATCTTTAGTCTTTTACAAGGGTAGGCCACCAAAGGGTATCAAAACTAATTGGATTATGCACGAGTACAGATTGATTGGATCTCAAAAACAAACTAGCAAGCATATTGGATCCATGAGACTAGATGACTGGGTTTTGTGCAGAATCTATAAGAAGAAACAAATGGGAAAAACATTGCAGCAAAAGGAGGAGTATTCAACACTTCAGTTTAATGATTCTACAATTACAAATAATGATGGTGAACAAGAAATGATGAACATGAACCTTCCAAGGACTTGTTCTCTTACCTATCTATTGGATATGAATCACTTTGGTCCAATCTTATGTGATGGCTCAACCTTTGATTTTCAAATACACAATTCCAATACTGGAATAGACTCTTTTTTAAAACCTCAGCCAGTTGAAATCAATAACTATTATGAAGCAGATTCACAGAGTACCATCACCAATCAGCCAATATTTGTGAAACAAATGCATAATTATTTAGGATAA 876 0.3642 MCHIIRRRNHNQTLFCNQLMETNTSSELPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWELPDKSEFGENEWYFFSPRERKYPNGVRPNRATLSGYWKATGTDKAINSGSKQIGVKKSLVFYKGRPPKGIKTNWIMHEYRLIGSQKQTSKHIGSMRLDDWVLCRIYKKKQMGKTLQQKEEYSTLQFNDSTITNNDGEQEMMNMNLPRTCSLTYLLDMNHFGPILCDGSTFDFQIHNSNTGIDSFLKPQPVEINNYYEADSQSTITNQPIFVKQMHNYLG* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3736 291 Pfam No apical meristem (NAM) protein 29 153 IPR003441 GO:0003677|GO:0006355
Tpr2g3736 291 PANTHER BNAC06G30680D PROTEIN 20 254 - -
Tpr2g3736 291 PANTHER NAC TRANSCRIPTION FACTOR 56 20 254 - -
Tpr2g3736 291 SUPERFAMILY NAC domain 19 180 IPR036093 GO:0003677|GO:0006355
Tpr2g3736 291 ProSiteProfiles NAC domain profile. 28 180 IPR003441 GO:0003677|GO:0006355
Tpr2g3736 291 Gene3D NAC domain 37 185 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3736 Tpr-Chr2 40364700 40366693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3736 20 235 NAC Transcription Factor Family AT1G69490 67.111 2.39e-113 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr2g3736 NAM 9.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3736 - - gmx:100785110 410.609