Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3732 ATGGGTAGGTCACCTTGTTGTGAGAAAGTTGGATTGAAGAAAGGACCATGGACTCCTGAGGAAGACCAAAAACTCATTGCTTACATTGAAGAATTTGGTCATGGAAGCTGGCGTGCATTACCTGCCAAAGCTGGGCTACAAAGATGTGGAAAGAGCTGTAGACTAAGATGGACTAACTACCTCCGACCTGACATAAAAAGAGGAAAGTTTAGTTTGCAGGAAGAGCAAACCATTATTCAACTTCATGCCCTTCTTGGAAACAGATGGTCTGCAATAGCAGCTCAACTTCCAAGAAGAACAGACAACGAGATCAAGAACTATTGGAACACACACCTCAAAAAGAGGTTAACAAGAATGGGAATAGACCCTACAACTCACAAACCAAAAACAGATCACACATCAGCTGGAAGTTCCACTTGCAATCAGTACTCCAAAGACTCAGCTAACCTCAGCCACATGGCTCAATGGGAAAGTGCTCGTTTAGAAGCTGAAGCAAGACTTGTTAGAGAAACCAACAAATTGAAAGTTCAAAAACAACTCGAATTCGAATCCTCCAGACCACAAGCAAGACTATTTCTCAACAAAATCACACCACTTCAACAACCTTCACTTCCACCTTGTCTTGATATCCTTAAAGCATGGCAGAGTTCATGGTCCAAACCAACAACAACAACAACAACAAAAGATGAAACAAACAACAAAGTGCATAGCATGTATGCTATGATGTTATCTAATGATGAAAATCTTGAATCTCCAACATCCACTTTAAACTTCCCTGGAACAACTCTACTTCCTCTGCCTCTTCCTCTGTCTCTTCCTGTTTCTGTTCCTATGACCAACAACATTAATGTTGTAGCATTCAATCAAAATTTACTTCCTTTAACTGATCAAAGCACCAATAATGATGATGAGATATGGAAACAATTCAATTTAACCAAACAGAACACAACAGAAACTCATGATGATCATGACAATGTCAATAACAACAACATGTTGAACTTTCAGCAAGATGATGATATAATGGCGGCTGTGGAAGCATTTAGATCATGTGGTGGATTTGACAATAATATTAACACCCCTCCAATTTCAACAAATGTTCTTCATGAAAATTTGGATGGAAGCATGATGTGTAACGTGAATCTTGAAGAGAATAAGCATTATTGGAATAGTATACTTGGTTTGGTTAATGAATCTGATGACATAAACATTAATGTCCAATGA 1221 0.3857 MGRSPCCEKVGLKKGPWTPEEDQKLIAYIEEFGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIAAQLPRRTDNEIKNYWNTHLKKRLTRMGIDPTTHKPKTDHTSAGSSTCNQYSKDSANLSHMAQWESARLEAEARLVRETNKLKVQKQLEFESSRPQARLFLNKITPLQQPSLPPCLDILKAWQSSWSKPTTTTTTKDETNNKVHSMYAMMLSNDENLESPTSTLNFPGTTLLPLPLPLSLPVSVPMTNNINVVAFNQNLLPLTDQSTNNDDEIWKQFNLTKQNTTETHDDHDNVNNNNMLNFQQDDDIMAAVEAFRSCGGFDNNINTPPISTNVLHENLDGSMMCNVNLEENKHYWNSILGLVNESDDININVQ* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3732 406 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Tpr2g3732 406 MobiDBLite consensus disorder prediction 121 140 - -
Tpr2g3732 406 CDD SANT 69 112 IPR001005 -
Tpr2g3732 406 CDD SANT 16 61 IPR001005 -
Tpr2g3732 406 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 367 - -
Tpr2g3732 406 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 370 398 - -
Tpr2g3732 406 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Tpr2g3732 406 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Tpr2g3732 406 SMART sant 13 63 IPR001005 -
Tpr2g3732 406 SMART sant 66 114 IPR001005 -
Tpr2g3732 406 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Tpr2g3732 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 367 - -
Tpr2g3732 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 370 398 - -
Tpr2g3732 406 Gene3D - 69 142 - -
Tpr2g3732 406 Gene3D - 13 66 - -
Tpr2g3732 406 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Tpr2g3732 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Tpr2g3732 406 Coils Coil 153 173 - -
Tpr2g3732 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3732 Tpr-Chr2 40336708 40338778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3732 1 269 MYB Transcription Factor Family AT3G01140 58.974 4.60e-105 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr2g3732 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3732 K09422 - gmx:100809025 466.077