Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3720 ATGGTTGGGGGTGGAAATGGAGAGTGGCCTAGTGGTGGTGGGTTTAGTCCTGGTCCCATGACTTTGATTTCCAGCTTGTTCGGGGACAACGATGACTGTAAGACGTTCTCAGAGCTCCTCGCTGGCGCCATGTTGGATGTGGAGCATGGAGGAGGAAGAGCTGCTGGTGGTGGTGGTTTGTTAACAGCTCCACCTCAGCAAGCACAAGGACAAGGCTACTCCAATGTTCAAATTCAATCTGAACATGCATTTTCTGTATCAGTACTACCTACTACTACTACCTCATTGACACAAGTTCCTGCAGTTACATTCAATAACATTCCACAACAACTGATACCAAATTATGAGGAATCAAAGACAAAATCAGTCGATTATTCTTCTAACTCAGAACATAGAATGCAGCAGTCTTCTTTTGAGAAGGCTAATGATGACGGCTACAACTGGAGGAAGTATGGACAAAAACAAGTCAAAGGTTGCGAGTTTCCTCGAAGTTATTATAAGTGCACACATCCTAGCTGTCCTGTGAAGAAGAAAGTCGAACGCGATCTTGTTGATGGTCATGTTACTCAAATTATTTATAAAGGAGAGCACATTCATCAACGCCCTCATCCTAGCAAGCTCACAAAAGAGAATTCAAATGTGCAACAAGATCGCGTAGATTATGAAACATGTGACAGTGATGAAGAAGGAGATAATGAAACTGAAGTAGATTATGAACCTGATCTCAAGAAAAGAAACACAGAAGTTAGGCTCCTAGATCCATCCTTTTCACATGGGACTGTCTCAAAGCCTAAAATCATTGTACAAACAACAAGTGATGTGGATCTCTTAGAGGACGGATATAGATGGCGTAAATATGGCCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAATGCACAACTCCAGGTTGCAATGTTCGGAAGCATGTCGAGAGGGCTTCAACGGATCGTAAAGCTGTCATGACAACATATGAAGGAAAACATAATCATGATGTGCCAACAGCTAAGACTAATAGCCACACCCTTGCTAGCAATAATAGTGCATCACAACTAAAATCACAAAATGTCATACCCGAGATGCATAATATGAACAGAAGGGGTCAGCAGCCTTCAACAGTGGCACGTCTAAGGTTGAAGGAAGAACATAGTGCATAG 1167 0.425 MVGGGNGEWPSGGGFSPGPMTLISSLFGDNDDCKTFSELLAGAMLDVEHGGGRAAGGGGLLTAPPQQAQGQGYSNVQIQSEHAFSVSVLPTTTTSLTQVPAVTFNNIPQQLIPNYEESKTKSVDYSSNSEHRMQQSSFEKANDDGYNWRKYGQKQVKGCEFPRSYYKCTHPSCPVKKKVERDLVDGHVTQIIYKGEHIHQRPHPSKLTKENSNVQQDRVDYETCDSDEEGDNETEVDYEPDLKKRNTEVRLLDPSFSHGTVSKPKIIVQTTSDVDLLEDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDRKAVMTTYEGKHNHDVPTAKTNSHTLASNNSASQLKSQNVIPEMHNMNRRGQQPSTVARLRLKEEHSA* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3720 388 Pfam WRKY DNA -binding domain 143 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 Pfam WRKY DNA -binding domain 278 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 MobiDBLite consensus disorder prediction 222 236 - -
Tpr2g3720 388 Gene3D WRKY domain 126 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 Gene3D WRKY domain 262 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 MobiDBLite consensus disorder prediction 339 353 - -
Tpr2g3720 388 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 MobiDBLite consensus disorder prediction 366 388 - -
Tpr2g3720 388 MobiDBLite consensus disorder prediction 199 237 - -
Tpr2g3720 388 ProSiteProfiles WRKY domain profile. 272 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 SUPERFAMILY WRKY DNA-binding domain 141 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 69 217 - -
Tpr2g3720 388 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 212 386 - -
Tpr2g3720 388 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 SMART WRKY_cls 277 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 SUPERFAMILY WRKY DNA-binding domain 269 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g3720 388 MobiDBLite consensus disorder prediction 332 353 - -
Tpr2g3720 388 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 212 386 IPR044810 GO:0003700
Tpr2g3720 388 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 69 217 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3720 Tpr-Chr2 40230558 40233012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3720 11 40 WRKY Transcription Factor Family AT2G03340 70.968 8.09e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g3720 WRKY 4.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3720 - - gmx:100127369 416.001