Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3711 ATGGCTTTTCTGGCCTATGTTCTGCTTTTCCTCTCCCTCACTGCTCATTCAAGTGCTTTTTACTGTGTTTGCAAAGATGGTGTGGCTATTAAACTTCTTCAGGAGGCAATTGATTATGCTTGTGGAACTGGAGCTGATTGTACCCCTATTCTTCAAAATGGACCTTGTTTCCAACCCAACACTGTAAAAGATCACTGTAACTATGCTGTTAACAGTTATTACCAAAGAAAGGGTAATGTTCAAGGTAGTTGTGATTTTGCTGGTGCTGCAACAACTTCTCAAACACCACCTACTGCAGTTTCTGGATGTGTTTACCCTTCAAGTCCTGGCAATGCAGGAACACCATCGACAGGTTCACCCGGTTCAACTCCAAGTACGGGAACCGGCACTGGCACTGGCACTGGCACGGGAGGAACTGCGGGTAGCCCTACTGTGTTTGGAATAAGTCCAACATCTACAATTAGTGGCAACGGTGATCCTTCTACAGCTGTAGTGTCTTATATGAAAAGCATCAACACCTTGCTATTTCCTTTGTTTGTTACCTTGTGTTTAGCCTTCAAGGTCTAA 567 0.4427 MAFLAYVLLFLSLTAHSSAFYCVCKDGVAIKLLQEAIDYACGTGADCTPILQNGPCFQPNTVKDHCNYAVNSYYQRKGNVQGSCDFAGAATTSQTPPTAVSGCVYPSSPGNAGTPSTGSPGSTPSTGTGTGTGTGTGGTAGSPTVFGISPTSTISGNGDPSTAVVSYMKSINTLLFPLFVTLCLAFKV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3711 188 MobiDBLite consensus disorder prediction 110 153 - -
Tpr2g3711 188 SMART X8_cls 20 105 IPR012946 -
Tpr2g3711 188 Gene3D - 14 108 - -
Tpr2g3711 188 PANTHER BETA-1,3 GLUCANASE 1 175 IPR044788 -
Tpr2g3711 188 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 175 - -
Tpr2g3711 188 Pfam X8 domain 21 91 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3711 Tpr-Chr2 40163618 40166517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3711 21 98 Glycoside Hydrolase AT2G01630 45.570 2.15e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3711 - - gmx:100801269 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3711 2 40163618 40166517 Tpr2g2075 2 24832548 24835643 PCT