Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3696 ATGGAGCTACGGCTTCAAATCTTTCTCATTTCTCTGCTCCTCGTCTTACTCCTCCCATTTTCTTCTTCATCAAAACCCAAAGACCCACTCCTCGGAATCGCACCTCAAGATGAAAAATATTTCAAGTCTTCCGATGTAATTAAATGTAAAGATGGATCCGCAAATTTCAACAAAGATCAGCTCAATGACGATTTCTGTGACTGCCCCGATGGCACCGATGAGCCTGGTACATCTGCATGTCCGAGTGGGAAATTTTATTGTCGAAATGCTGGGCATTCCCCTGTGTATCTGTTTTCATCTAGAGTGAATGATGGAATTTGCGATTGCTGTGATGGAAGTGATGAATATGATGGTAAAGCAAAGTGCCCAAATACCTGCTGGGAGGCTGGGAAAGTTGCTCGAGATAAGCTGAAAAAAAAGATTGCCACATATCAAGAGGGTGTCAAAGTGAGAAAGCAAGCAATTGAACAAGCACATTTAGCTCTGGAGAAGGATGCGGCGGAGCTTTCGAAATTGAAAAAAGAAGAAAGTATACTTAAAGGGGTTGTGAAACAGCTAAAGGATCATAAAGAACAAATAGACAAGGCAGAGGAGAAGGAGCGCTTACAGAAGGAAAAAGAAGAGAAGCAGAAGAAGGAGGCTGAGGAGAAGGAGAAGGCTAATGAAAAAAATAATAAAGCCGATGAAGAAGATACAGGACTTGAAAATGAAGCTGAAAAGCATTCACACATTGAAGACGATTCTGCGGCAAGCAACCATGAGAAAATTGAAGTTCAAGAGGATTCTCCGGTTTATCAGGATGAACCTGAGGAAAAGTTAGCAGACACTCTTGATAATTTTGTTGACGCCACTGATACCCCTGGAAGTGAAGGATCCTTGCTTAATAAAGCGGAAGAGAATGCAAAAGAATCTGAGAGAGGACCTGCTGTTGAATCTGAAACTGATTTGAGGACTGGAAAGCCAGAGTCTTCTGAAGAAGTCGTTAATAAGGGGGAAGATGTATCTGATAATACTGATGGATTATCAAAGGAAGAATTGGGCAGGCTTGTTGCTTCTCGTTGGACAGGAGAAGATGTTGGTAAGAAAAGTCCTGAAGCTGACACTGCATTAGACAATGAAGATCAGGAAGATACTTCACATGGGACAAATATAGAAGAGAATGAAGGATATGCTTCTGACACTGACGATGACAACCAAAAATATGATGAAGATGTAAATGATGAAGATGTAAATGATGATGAATTTCAAGAGGATGAGCACGACGACCTTAGTTCCTCTTACAAACCTGACGATGAGACTGAAACAGACTTTTCAGATGTTAGCACAACAGAAGATCCTTCTTGGTTAGAGAAAATACAGAAATCTGTATGGAATATGTTTCAAGCCGTTAATATATTCCAGACACCAGTGAACCAGTCAGATGCTGCTCGTATACGCAAGGAATACGACGAATCAAGTACCAAGTTGTCTAAAATACAGTCTAAAATATCAAGCCTAACACAAAAGCAAAAACTTGATTTTGGTCCAGCAAAGGAGTTTTATTCATTTTATGATCGTTGCTTTGAGAGCAAGCAGAACAAGTACATTTACAAAGTCTGCCCCTATAAGCAGGCTACTCAGGAGGAGGGCCATTCCACCACCCGTTTGGGTCGCTGGGACAAATTTGAGGATTCATACAAAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAACGGTCCTGATAGGAGTTTGAAGGTCAAACTTAAATGCGGGTTGACAAATGAGATTACCGATGTGGATGAACCAAGCCGCTGCGAGTACGTAGCTTTATTAGCTACCCCAGCCCTTTGTCAGGAAGAAAAGCTGAAGGAGTTACAACACAAGCTAGACTTACTGAATTCAGAACAACCAGAAAGCCATGATGAGTTGTGA 1914 0.4127 MELRLQIFLISLLLVLLLPFSSSSKPKDPLLGIAPQDEKYFKSSDVIKCKDGSANFNKDQLNDDFCDCPDGTDEPGTSACPSGKFYCRNAGHSPVYLFSSRVNDGICDCCDGSDEYDGKAKCPNTCWEAGKVARDKLKKKIATYQEGVKVRKQAIEQAHLALEKDAAELSKLKKEESILKGVVKQLKDHKEQIDKAEEKERLQKEKEEKQKKEAEEKEKANEKNNKADEEDTGLENEAEKHSHIEDDSAASNHEKIEVQEDSPVYQDEPEEKLADTLDNFVDATDTPGSEGSLLNKAEENAKESERGPAVESETDLRTGKPESSEEVVNKGEDVSDNTDGLSKEELGRLVASRWTGEDVGKKSPEADTALDNEDQEDTSHGTNIEENEGYASDTDDDNQKYDEDVNDEDVNDDEFQEDEHDDLSSSYKPDDETETDFSDVSTTEDPSWLEKIQKSVWNMFQAVNIFQTPVNQSDAARIRKEYDESSTKLSKIQSKISSLTQKQKLDFGPAKEFYSFYDRCFESKQNKYIYKVCPYKQATQEEGHSTTRLGRWDKFEDSYKVMVFSNGDKCWNGPDRSLKVKLKCGLTNEITDVDEPSRCEYVALLATPALCQEEKLKELQHKLDLLNSEQPESHDEL* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3696 637 Pfam Glucosidase II beta subunit-like protein 479 636 IPR036607 -
Tpr2g3696 637 Pfam Glucosidase II beta subunit-like 24 174 IPR028146 -
Tpr2g3696 637 Coils Coil 609 629 - -
Tpr2g3696 637 ProSiteProfiles MRH domain profile. 518 613 IPR044865 -
Tpr2g3696 637 MobiDBLite consensus disorder prediction 389 420 - -
Tpr2g3696 637 SUPERFAMILY Mannose 6-phosphate receptor domain 522 611 IPR009011 -
Tpr2g3696 637 Coils Coil 152 237 - -
Tpr2g3696 637 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 9 637 IPR039794 -
Tpr2g3696 637 MobiDBLite consensus disorder prediction 296 343 - -
Tpr2g3696 637 Gene3D - 513 611 IPR009011 -
Tpr2g3696 637 MobiDBLite consensus disorder prediction 186 278 - -
Tpr2g3696 637 PANTHER BNACNNG14010D PROTEIN 9 637 - -
Tpr2g3696 637 MobiDBLite consensus disorder prediction 358 383 - -
Tpr2g3696 637 MobiDBLite consensus disorder prediction 186 445 - -
Tpr2g3696 637 MobiDBLite consensus disorder prediction 421 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3696 Tpr-Chr2 40044572 40053543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3696 21 637 Calmodulin-binding Proteins AT5G56360 58.506 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3696 K08288 - gmx:100807083 873.618