Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3694 ATGCTGGGTGGGTTATACGGAGACCTACCTCCACCTTCTTCTGCCGAAGAAGAAAAACCAACCACCAATGTCTGGTCAAGCAGCACCAAAATGGCCCCCGCCACTCTCCGTAAACCATCTTCTCTTTTCACACCTCCTCACACCCTTCTCAGATCCCAAAACAAACCTAAAATCACCAATTCCAAAACGGTTCTGTCTTCTGCACCACCTATACTTGCTCCGGCACTTGAAGAGGTGATGCAACCGGCTCTGGTGGGCGTGCAGTCGACTGTGTTGGAGGAGTATGATCCTGCAAGGCCGAATGACTATGAGGAGTATCGAAGAGAGAAGAAGAGGAAGGCAAGGGAAGTGGAGATGATGAGGGAGCTGGAGAGACGGCGGGAGGAGGAGGAAGAGAGGGAGAGAGAAAGGGAGAGGGAAAGAGAGAAAGAAAGAGAAAGGGAGAGAGATAGGGATCAGGGTGATTCCAGGTTGAATATTTCGGGTGAGGAGGCCTGGAGGAGGCGTGTGGGGATGAGTGGAGGCGGTGGAGGTGGTGGGGCTGTGCCGAGGTCGCCATCACCTCCGGGGAATGTGGATGGATTTACTATTGGGAAGTCGGAGACTGGCGGCTTGGGGGTTGGTGCTGGTGGGCAGATGACTGCTGCTCAGAGGATGATGGCGAAGATGGGGTGGAAAGAAGGGCAAGGGCTTGGGAAACAGGAGCAAGGGATTACTACTCCGTTGATGGCGAAGAAAACCGATAGACGAGCTGGTGTTATTGTCAATGCCAGTGACAGTAAGTCTGATAAGAAAGTCAAGAGTGTTAACATCAATGGAGTACCTACCAGAGTGCTGCTACTTAGAAACATGGTGGGGCCTGGCGAGGTAGATGATGAGCTGGAAGAGGAGGTAGGATCAGAATGTGCCAAGTATGGAACAGTAACCCGAGTTCTGATATTTGAGATAACAGAGCCAAATTTTCCCACCGACGAAGCAGTGAGAATCTTTGTGCAGTTTGAGAGATCCGAAGAAACAACTAAAGCGCTTGTTGACCTTGATGGTCGATACTTTGGGGGTAGAGTAGTGCGTGCCACATTTTATGACGAGGATAAGTTTGGCAAGAATGAGCTAGCTCCGATGCCAGGAGAAATTCCTGGCTTCACTTAG 1149 0.51 MLGGLYGDLPPPSSAEEEKPTTNVWSSSTKMAPATLRKPSSLFTPPHTLLRSQNKPKITNSKTVLSSAPPILAPALEEVMQPALVGVQSTVLEEYDPARPNDYEEYRREKKRKAREVEMMRELERRREEEEEREREREREREKERERERDRDQGDSRLNISGEEAWRRRVGMSGGGGGGGAVPRSPSPPGNVDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIVNASDSKSDKKVKSVNINGVPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPTDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEDKFGKNELAPMPGEIPGFT* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3694 382 MobiDBLite consensus disorder prediction 88 190 - -
Tpr2g3694 382 MobiDBLite consensus disorder prediction 1 62 - -
Tpr2g3694 382 PIRSF SPF45 3 378 IPR040052 GO:0045292
Tpr2g3694 382 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 267 363 IPR000504 GO:0003723
Tpr2g3694 382 CDD RRM_UHM_SPF45 275 371 IPR034653 -
Tpr2g3694 382 Gene3D - 273 371 IPR012677 -
Tpr2g3694 382 Coils Coil 103 153 - -
Tpr2g3694 382 Pfam G-patch domain 215 254 IPR000467 GO:0003676
Tpr2g3694 382 PANTHER SPLICING FACTOR 45 SPF45 1 373 IPR040052 GO:0045292
Tpr2g3694 382 SMART rrm2_1 278 359 IPR003954 GO:0003676
Tpr2g3694 382 MobiDBLite consensus disorder prediction 16 62 - -
Tpr2g3694 382 SUPERFAMILY RNA-binding domain, RBD 279 365 IPR035979 GO:0003676
Tpr2g3694 382 MobiDBLite consensus disorder prediction 97 164 - -
Tpr2g3694 382 SMART G-patch_5 210 256 IPR000467 GO:0003676
Tpr2g3694 382 ProSiteProfiles G-patch domain profile. 212 258 IPR000467 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3694 218 253 C2H2 Transcription Factor Family AT5G26610 61.111 1.43e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3694 K12840 - zju:107418861 510.375