Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3691 ATGGAGTTTTCGGTTGAGGCGGTGGGAAGCATAGACAACTGTTTCGTATCCCTTCCCTTACCTCTAATCCAAACTCTTCAATCAACAGCTTCATCCTCTCTTCCTCCAATTCTCGCTCTTCACCTTCGTTCTCCCACTCACCCTCCTCACTCCTGGTTCGTCGCTTGGTCCGGCGCCACTTCTTCATCCTCTTCAACCATACAAGTTTCTCAACAATTTGCTGAATGCGTTTCTTTACCGATTCATTCTCCAGTTCAAGTTAAAGTTGCTTCCAATGTTCCTCATGCTTCTTCCGTTTCTATAGAGCCAGACACTGAAGATGATTGGGAAATTTTGGAACTTAATTCTGAACAAGCTGAGAATCAAATTCTCAATCAGGTTCGGATTGTTCATGAAGGGATGAGGTTTCCTTTACGGTTGAATGGTCACACTGTCATCACATTTCATGTTGCTTCTGTTTTTCCCAAGAATGCGGTGGGAACTGAAGTTGAGGTTGCTCCAAAGACGCGCAAAAGGAATTCAGATTCAGCAGGAGATTCACATGTAGGTTCTAATAGTAGAGACCATACTGCAAAGACGCTGCTCCGTTTACAAGAACCGAATGATTTATTTCGTACCAGTACTCATATCAAAGGTGTTGAGCTTAATGTAGGCCTTACTTCGGTTGCTGTTGTTCATCCAGAAACAGCCAAGCGCTTCTCATTTAACACGCTTCAGTTGGTTTCCATAGTACCAAGAGTATCGAACGAGAATGTTAATAATTCCAGAACCAAATCCAATATTATGAAAGCCAAAGGTGGTTCAGCTGTTAATGAAGTTGAGAATGGAAATACTGACAAGAAGGAACATCGACAAGCAGTTGTTCATCTGTTGATTTCAGAATCTGTAGCTAAAGGACATGTAATGCTAGCTAAGTCTCTTCGCCTTTATTTGAGAGCTACCCTGCATTCATGGGTTTATTTGAAGGCATGTGATATTATTTTGGAAAAAACCATCCCTTCCATTTCTCTTTGTCCTTGTCGATTCAAACTGGTGGTAAGGCAGGAGAATGCTGTTGAGAAAGATGGTCTAGATGATTTTCACAGCCACAGGAATCACACTGATGAAAAATTGCATGGGAAAGCCACTTCAGGTGCCTTTTTGGATACCATAAATTGGTCAATGCACAGTGAACTTGTTGCGGCTCTTTCTGATGAATCCAGTTACAGAGAAGAGGAAGAGGTTGCAAACCAATCTCAAAATCAAAAGGGATTACAAAGTCTTGTACGGCTATGGTATATTGCACAGCTTGAGGCAATTACTTCCATTCTGGGGATGGAATTTAATTCATTGGTTATCAGTAGTAAAACCTTGCTCCATTTTGAATTAAGCTGTTACAAGTTTGGGAGTGATGAGAAGCATCAGCTGACTTCTTCCGGAAACAGTGGCAAAGCAGCTGAAATGTTATTTTTATTGATCTTTGGTGAAGAAGATCTGCATCATGGAAAACTTAATGCATATGAAGTTTCACTTGGTGGCAGACTCAATAGCATCAACGTTGAGGATCTGAAGTTTTTTGAAAGAATGAAATTGGGTGGTCCTGTTTCTATTCATTCTTTGGACGAGAGTGCCTCTGCAGACCACATTCGTTCAAATGTACCTTTACTTGGCTGGATGGAGAAAACTGCTTCTGATGTTATCAATAGGATGTTGATATTGTTATCTTCAGCATGTGGTTTGTGGTTTGGATCATGCAACATGCCACTTCCTGGACATGTTGTAATATATGGACCTCCGGGCTCTGGGAAAACTATACTCGCAACGAATGTGGCAATATCCCTTGAGAAGCATGAAGACATCTTAGCGCACATAGTTTTTGTTTCCTGCTCAAAACTTGCTTTGGAGAAGGTCCCAGTTATTCGTCAAGAACTTGCAAACCATATAACTGAAGCTATAAACCATGCACCTTCTGTAGTCATCTTTGATAATCTTGATAGTATAATTTCTACCCCTGATTCCGAAGGTTCTCAGCCATCAATGCCTGTTGCTGGACTCACAGATTTTCTAGTTGACATCATGGATGAATATGGGGAGAAGAGGCGAAAGTCATGTGGATTTGGTCCAATAGCTTTCATAGCTACCATACAGTCCCTAGAGAGTATACCACAATCTTTGAGCTCTTCAGGACGGTTTGACTTTCACATTAAACTGCCTGCTCCTGCAGCTTCTGAGCGCAAAGCTATGTTGAAGCATGTAATACAAAGGCGACACTTGCAATGCAATGATGACATCCTGCTTGATGTGGCAGTAAAATGTGATGGTTATGATGGCTATGATCTGGAAATTTTAGTTGACAGAACTGTCCATGCTGCTGTTCGCCGTTTTCTGCCGTCTAATGCCATTTATGAGCACGAGGGTCCTGCTTTACTACCAGAGGATTTTTCTCAGGCAATGCATGATTTTCTCCCAGTTGCAATGCGTGACATCACAAAATCTGTTTCTGATGATGGCCGTTCTGGATGGGATGATGTCGGTGGTCTTGTTGATATTCGAAATGCTATTAAAGAGATGATCGAGTTGCCATCAAAGTTTCCAAAAACTTTTGCGCAAGCACCATTAAGGTTGCGGTCAAATATCCTTTTATATGGTCCTCCTGGTTGTGGCAAAACTCACATAGTCGGTGCTGCTGCTGCTGCTTCTTCGCTTCGATTCATATCAGTGAAAGGGCCAGAACTGTTAAATAAATACATTGGTGCTTCTGAACAAGCTGTTAGGGATATATTTTCTAAAGCAGCTGCTGCAGCACCATGCCTGCTTTTTTTTGATGAATTTGATTCTATTGCTCCTAAGAGAGGGCACGACAATACTGGAGTAACTGACCGTGTTGTCAATCAATTTTTGACTGAGTTAGACGGTGTTGAGATTTTAGCTGGTGTATTTGTGTTTGCTGCAACCAGTAGACCGGATCTACTGGATGCAGCCTTGTTGAGACCGGGCAGGTTAGATCGTCTTCTATTTTGCGACTTTCCATCTTGGCATGAGAGATTGGAAATTCTTACAGTACTTTCTAGAAAGTTACCAATGGCCAATGATATTGATTTGGCTGCAGTAGCTAATATGACTGAGGGATTCAGTGGAGCTGATCTCCAAGCTCTCCTCTCAGATGCACAACTTGCAGCAGTTCATGATATTCTGGACAATATCAATACGTCTGGGTCAGAGAAAACACCAGTTATTACTGATGCTCTTCTAAAGCTCACTGCATCGAAGACCAGACCATCTGTTTCAGAGGAAGAGAAAAGACGACTCTACAGTATTTATCACCAGTTCCTGGATTCAAAGAGATCCGTTGCAGCCCAGTCAAGGGATGCAAAAGGCAAGAGGGCAACTCTAGCGTGA 3378 0.421 MEFSVEAVGSIDNCFVSLPLPLIQTLQSTASSSLPPILALHLRSPTHPPHSWFVAWSGATSSSSSTIQVSQQFAECVSLPIHSPVQVKVASNVPHASSVSIEPDTEDDWEILELNSEQAENQILNQVRIVHEGMRFPLRLNGHTVITFHVASVFPKNAVGTEVEVAPKTRKRNSDSAGDSHVGSNSRDHTAKTLLRLQEPNDLFRTSTHIKGVELNVGLTSVAVVHPETAKRFSFNTLQLVSIVPRVSNENVNNSRTKSNIMKAKGGSAVNEVENGNTDKKEHRQAVVHLLISESVAKGHVMLAKSLRLYLRATLHSWVYLKACDIILEKTIPSISLCPCRFKLVVRQENAVEKDGLDDFHSHRNHTDEKLHGKATSGAFLDTINWSMHSELVAALSDESSYREEEEVANQSQNQKGLQSLVRLWYIAQLEAITSILGMEFNSLVISSKTLLHFELSCYKFGSDEKHQLTSSGNSGKAAEMLFLLIFGEEDLHHGKLNAYEVSLGGRLNSINVEDLKFFERMKLGGPVSIHSLDESASADHIRSNVPLLGWMEKTASDVINRMLILLSSACGLWFGSCNMPLPGHVVIYGPPGSGKTILATNVAISLEKHEDILAHIVFVSCSKLALEKVPVIRQELANHITEAINHAPSVVIFDNLDSIISTPDSEGSQPSMPVAGLTDFLVDIMDEYGEKRRKSCGFGPIAFIATIQSLESIPQSLSSSGRFDFHIKLPAPAASERKAMLKHVIQRRHLQCNDDILLDVAVKCDGYDGYDLEILVDRTVHAAVRRFLPSNAIYEHEGPALLPEDFSQAMHDFLPVAMRDITKSVSDDGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNILLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILAGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMANDIDLAAVANMTEGFSGADLQALLSDAQLAAVHDILDNINTSGSEKTPVITDALLKLTASKTRPSVSEEEKRRLYSIYHQFLDSKRSVAAQSRDAKGKRATLA* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3691 1125 SUPERFAMILY ADC-like 10 88 IPR009010 -
Tpr2g3691 1125 CDD AAA 583 731 - -
Tpr2g3691 1125 CDD AAA 838 1001 - -
Tpr2g3691 1125 Pfam AAA+ lid domain 1024 1062 IPR041569 -
Tpr2g3691 1125 Gene3D - 549 733 IPR027417 -
Tpr2g3691 1125 Pfam ATPase family associated with various cellular activities (AAA) 872 999 IPR003959 GO:0005524|GO:0016887
Tpr2g3691 1125 Pfam ATPase family associated with various cellular activities (AAA) 586 731 IPR003959 GO:0005524|GO:0016887
Tpr2g3691 1125 Gene3D - 1003 1082 - -
Tpr2g3691 1125 PANTHER AAA-FAMILY ATPASE 5 1122 - -
Tpr2g3691 1125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 834 1094 IPR027417 -
Tpr2g3691 1125 SUPERFAMILY Cdc48 domain 2-like 94 167 IPR029067 -
Tpr2g3691 1125 Gene3D - 734 827 - -
Tpr2g3691 1125 MobiDBLite consensus disorder prediction 164 191 - -
Tpr2g3691 1125 PANTHER - 5 1122 - -
Tpr2g3691 1125 SMART AAA_5 582 734 IPR003593 -
Tpr2g3691 1125 SMART AAA_5 868 1004 IPR003593 -
Tpr2g3691 1125 Pfam Peroxisome biogenesis factor 1, N-terminal 98 158 IPR015342 GO:0005524|GO:0005777|GO:0007031
Tpr2g3691 1125 Gene3D - 833 1095 IPR027417 -
Tpr2g3691 1125 ProSitePatterns AAA-protein family signature. 972 990 IPR003960 GO:0005524|GO:0016887
Tpr2g3691 1125 Gene3D - 93 169 - -
Tpr2g3691 1125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 567 812 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3691 Tpr-Chr2 40008113 40022914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3691 583 789 Calmodulin-binding Proteins AT3G56690 28.365 3.49e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3691 K13338 - gmx:100803882 1795.4