Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3668 ATGGCGTCTGTGAATCAAAGAAAAAGGACGATGATTGCGTCTTTGAATCTAACTAAAGGGGCGATAATGACAATTTGTAGTGACAATTTCTCTTGTAATAGTTTTAAGCCGGTGGTGGTTCAAGTTATCGATGTGAAGCGGGTGCGGTGCTCGGTAACCGACGGATGCTACTGCGTCAGTCTTACGTTCTCCGATGGTTCCCATTCTATCGTTGGAGTTCTAGCCAATAATCTGGAAGAATTTGTTCAATCTGGAAGGTTGCAGAAAAGCTCTGTTGTTATGCTTACTCGATTCTTCTTCAGTTCACTTTTATGTCGCAAGGTTCTTATCATCACTGGGCTTCATGTTATAATGGACAAATGTGTGCTGATTGGAAATCCTGTTCCACCGAGCAAATCAAATTGTGCTGATCATTCTGACACTTTTGACTGTGATAGTGATATGGCTATTGTACCAATGGTTTCCACTGATGAGGACATTCCCCATGCTAAGGAGAAAAAGAAAGCTGAAGAACCTATCCCTGCTTGTTCTTCAAAACAACTCATATTCCATTATTCTTGCATGACTGAAGACGAAGACGAAGATGATCCTATTCTGTCCGCCAATTTGAAGGAGTTTGATGATTTTTGGGACAATCTTATAACTTCTAAGGAAATTGGGTTTGACAAGATATGGAATGATTTCATGCTAGAATTAGAATGTATGAAGTTGGGTTGGGAGAGAGACGAGTACAAGAATACTGAGGCTGAGTGTGGTATGCATCGACCAAAAGTAGGACTTTCTTTGACGAAGAAACCTGACTTGGAAGCTGCTACTCAGTATATACATGGCTTCAAAAATGCTCAAGCTCAACCGGCCTTGTTCTGCTGTGCAGGTACTGATCACTCTGCTATGGACATGTTCAAAAGATTGTGTAATGGTGAGATTCATAGTGATGATGAGAAGGAAGAAGATGGAGGAGAAGCATCTCATGTGGATGCATAA 984 0.4116 MASVNQRKRTMIASLNLTKGAIMTICSDNFSCNSFKPVVVQVIDVKRVRCSVTDGCYCVSLTFSDGSHSIVGVLANNLEEFVQSGRLQKSSVVMLTRFFFSSLLCRKVLIITGLHVIMDKCVLIGNPVPPSKSNCADHSDTFDCDSDMAIVPMVSTDEDIPHAKEKKKAEEPIPACSSKQLIFHYSCMTEDEDEDDPILSANLKEFDDFWDNLITSKEIGFDKIWNDFMLELECMKLGWERDEYKNTEAECGMHRPKVGLSLTKKPDLEAATQYIHGFKNAQAQPALFCCAGTDHSAMDMFKRLCNGEIHSDDEKEEDGGEASHVDA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3668 327 Pfam Replication factor-A protein 1, N-terminal domain 17 118 IPR007199 GO:0003677|GO:0005634|GO:0006260
Tpr2g3668 327 SUPERFAMILY Nucleic acid-binding proteins 15 126 IPR012340 -
Tpr2g3668 327 Gene3D - 16 130 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3668 Tpr-Chr2 39771365 39772810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3668 15 141 Core DNA Replication Machinery Family AT4G19130 30.709 1.83e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3668 - K16608 lja:Lj2g3v1548470.1 87.8113