Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3647 ATGGAGAACATTTTAGGTCTTATAAGACTTCGTATAAAAAAAGGCACTAATCTCATACCTCGCGATTCTCGTACCAGTGACCCTTATGTTGTTGTCACCATGGCCGAACAGACACTGAAAACTGGTGTTGTCAAAGATAACTTGCATCCTGAATGGAATGAAGAATTAACACTTTATATTCAAGATAAAGATATTAACACACCAATACTACTGACAGTTTGCGACAAAGACACTTTCACAGTGGATGACAAAATGGGCGAAGCAGACATAGACATAAAACCATATCTTCAATGTGTGAAGATGGGATTGAGCGATCTCCCAGATGGACATGTAGTCAAAGTTATTCAACCAGATAGGACGAATTGTCTTACCGATGAAAGTAGCTGCATATGGAGAAATGGTAAAGTTGTCCAAGAAATGAGTTTAAGATTGAGAAACGTCAAGTCTGGTGAAGTACTCGTCGAAATTGAGTGGATCGATGTTACGGATTCCAGAGGCTTATCAGAGGTTGATGACATTTAG 522 0.3908 MENILGLIRLRIKKGTNLIPRDSRTSDPYVVVTMAEQTLKTGVVKDNLHPEWNEELTLYIQDKDINTPILLTVCDKDTFTVDDKMGEADIDIKPYLQCVKMGLSDLPDGHVVKVIQPDRTNCLTDESSCIWRNGKVVQEMSLRLRNVKSGEVLVEIEWIDVTDSRGLSEVDDI* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3647 173 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 169 - -
Tpr2g3647 173 SMART C2_3c 7 104 IPR000008 -
Tpr2g3647 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 160 IPR035892 -
Tpr2g3647 173 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Tpr2g3647 173 Pfam C2 domain 7 94 IPR000008 -
Tpr2g3647 173 Gene3D C2 domain 4 170 IPR035892 -
Tpr2g3647 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 169 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3647 Tpr-Chr2 39559547 39561647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3647 39 168 C2H2 Transcription Factor Family AT1G70790 53.788 2.67e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3647 - - gmx:100781585 276.944