Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3644 ATGCAGCCACAACAAAGCTCAAGATGGAGTCCAACACCAGTTCAATTACTAGTCCTTGAAGAATTGTATAGGCAAGGAATGAAAACACCATCAGCTGAACAAATCCAACAAATAGCTTCACAGCTTCGACAATTCGGGAAGATTGAAGGGAAAAATGTGTTCTACTGGTTCCAAAATCACAAAGCGAGAGAGCGACAGAAGCGTCGTCGCAGGGAGATGGAGGAAACAACTGGTTCTTCAAATGAAGATAAAAAAGAGAAAGAGAAGTACCTTATGCAAAATTCAGAAAAGCAAGAAAATGCAGGATTGAAAGAGACAGGTAGTGGAGTTAAAGAGACAAAGAAGTGGGGAACCACTTCAAACTTCAGTGAACAAGCAGAGGATATAGCAGAAAAGGGATCAATACAAGTTTTGAGGAAAAACATAGCTGCAGAAAGGCAAAGAAAGTGCCAAAATATTGAAATTCCTTATTACTTCACACCTTTTACTAAAACTTCTTCAGTAGCAGCAGCAAACAGAACATGTAGTAATAATAACACACCTCATCCAAATTATGAAGAACAAAATGCAGATTATCCCAGGACACTGGATCTTTTTCCAATTAAGGAGGATGAACAAGATGGAATTTGTCTCTCTGAGAGAAAATCTTTGTTCTGTGTTAATGCTTCTTCTATGGACACTCATGAAATCACATCTTCCAACCAGTTTTTTGAGTTTCTTCCTTTAAGAAATTGA 735 0.3796 MQPQQSSRWSPTPVQLLVLEELYRQGMKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRREMEETTGSSNEDKKEKEKYLMQNSEKQENAGLKETGSGVKETKKWGTTSNFSEQAEDIAEKGSIQVLRKNIAAERQRKCQNIEIPYYFTPFTKTSSVAAANRTCSNNNTPHPNYEEQNADYPRTLDLFPIKEDEQDGICLSERKSLFCVNASSMDTHEITSSNQFFEFLPLRN* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3644 244 Gene3D - 1 72 - -
Tpr2g3644 244 CDD homeodomain 8 62 IPR001356 GO:0003677
Tpr2g3644 244 SMART HOX_1 4 71 IPR001356 GO:0003677
Tpr2g3644 244 MobiDBLite consensus disorder prediction 68 94 - -
Tpr2g3644 244 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Tpr2g3644 244 SUPERFAMILY Homeodomain-like 4 70 IPR009057 -
Tpr2g3644 244 Pfam Homeodomain 6 66 IPR001356 GO:0003677
Tpr2g3644 244 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 244 IPR044555 GO:0003700|GO:0099402
Tpr2g3644 244 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 244 - -
Tpr2g3644 244 MobiDBLite consensus disorder prediction 64 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3644 Tpr-Chr2 39521246 39522985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3644 6 244 Wox Gene Family AT3G18010 33.663 1.48e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tpr2g3644 Homeodomain 2.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3644 - - cam:101505693 308.531