Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3640 ATGGATCCTAATACTTGCAACATGCATTCACATTGTGTACACATGGAAATTCATCAAGTTGTTCCACCACCCCACAAAAGCACTTTAAACAAACTCAAAGTTAGGCTCAAGGAAACTTTTTTCCCTGATGATCCTCTGCGCCAATTCAAGGGAAAATCACTTAAAACAAAAATTATCTTAGGAGCTAACTATTTTTTCCCTATTCTTCAATGGGGTTCTAATTATAGCTTCAAACTCTTTAAATCTGACCTTATTTCTGGTCTCACTATTGCTAGCTTAGCCATCCCACAGGGAATTAGTTATGCCAAGCTTGCAAATCTTCCTCCAATTGTAGGACTATATTCTAGTTTTGTTCCTCCACTTATTTATGCTGTTCTTGGAAGTTCAAGGGATCTAGCAGTAGGACCTGTTTCAATTGCATCTCTTGTTTTAGGATCCATGCTTAGACAAGAAGTATCTCCTTCAGCAGAACCTGTTCTGTTTCTACAACTTGCTCTTACTTCAACTTTCTTTGCTGGTTTATTTCAAGCTTCACTAGGAATTCTAAGATTAGGATTTATCATTGATTTTTTATCAAAGGCAATCCTAATTGGATTCATGGCTGGTGCTGCTATAATTGTGTCTTTGCAACAACTTAAGAGCTTACTTGGAATCACACATTTTACTAAAGAAATGGGTCTTGTTCCTGTTATGACTTCTGTTTTTCACAATATACATGAGTGGTCATGGCAAACAATAGTGATGGGAATTTGCTTCTTGGTGTTGCTACTAATAGCAAGACACGTTAGCATAAGAAAACCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTATGTGTGTCATCATCTCTACTCTTTTTTGTTTTGCAATCAAGGCTCAAAATCATGGCATCAGTTTAATTGGAAAATTACATCAAGGAATAAATCCTTCTTCATGGAATATGTTGAAATTTCATGGAAGTCATCTTGGTCTAGTCATGAAAACTGGCCTAATCACTGGCATTTTGTCACTCACCGAAGGTATTGCAGTAGGAAGGACATTTGCAGCTCTGGGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGGTTCATGAATGTGGTTGGCTCCTCCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGTTCAGCTGTTAATAATAACGCAGGAGCGAAAACAGCAGCTTCAAATATAGTAATGTCTGTGACAGTGATGGTGACACTTCTTTTTCTTATGCCATTGTTCCAATACACGCCTAATGTTGTATTGGGTGCAATCATAGTCACAGCAGTGATTGGCCTCATCGATATCCCTGCTGCTTGCCACATTTGGAAGATAGACAAATTCGACTTCCTTGTGATGTTAATTGCTTTCTTGGGTGTTATTTTTATCTCAGTCCAGGAAGGTCTTGCTATTGCAGTTGGATTGTCGACTTTTAGGATACTCCTGCAAATTACAAGGCCAAAAACAGTAATGATGGGGAACATACCAGGGACAGACATATATAGAAATCTTCATCAATACAAGGACGCTACAAGAATACCAGGCTTTCTTATTTTAAGCATCGAGGCTCCGATCAATTTTGCAAACATCACATATCTCAATGACAGGACATTGCGATGGATTGAAGAGGAAGAAGAAGATAACATAAAGGAACAATCAAGTCTTCGATTTTTAATCCTGGATATGTCAGCTGTGAGCGCCATTGACACAAGTGGAATCTCACTTTTCAAGGAGTTAAAGGCAACAATGGAAAAGAAGGGTGTTGAGCTTGTGTTGGTTAATCCTCTCGCCGAAGTCATTGAAAAGCTGAAAAAAGCAGACGAATCTAATACTTTCATACGAGCAGACAACCTTTTCTTGACAGTTGGAGAGGCTGTGGCGTCACTTTCATCAACAATGAAGACCCAATCAACCACGACAGAAGAAGCACATACAATCGTTCCACATTACTGA 1968 0.3902 MDPNTCNMHSHCVHMEIHQVVPPPHKSTLNKLKVRLKETFFPDDPLRQFKGKSLKTKIILGANYFFPILQWGSNYSFKLFKSDLISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPSAEPVLFLQLALTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKEMGLVPVMTSVFHNIHEWSWQTIVMGICFLVLLLIARHVSIRKPKLFWVSAGAPLMCVIISTLFCFAIKAQNHGISLIGKLHQGINPSSWNMLKFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALGNYKVDGNKEMMAIGFMNVVGSSTSCYVTTGAFSRSAVNNNAGAKTAASNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACHIWKIDKFDFLVMLIAFLGVIFISVQEGLAIAVGLSTFRILLQITRPKTVMMGNIPGTDIYRNLHQYKDATRIPGFLILSIEAPINFANITYLNDRTLRWIEEEEEDNIKEQSSLRFLILDMSAVSAIDTSGISLFKELKATMEKKGVELVLVNPLAEVIEKLKKADESNTFIRADNLFLTVGEAVASLSSTMKTQSTTTEEAHTIVPHY* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3640 655 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Tpr2g3640 655 CDD STAS_SulP_like_sulfate_transporter 512 612 - -
Tpr2g3640 655 PANTHER BNAA09G30120D PROTEIN 16 636 IPR030313 -
Tpr2g3640 655 SUPERFAMILY SpoIIaa-like 516 634 IPR036513 -
Tpr2g3640 655 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr2g3640 655 Gene3D STAS domain 491 637 IPR036513 -
Tpr2g3640 655 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Tpr2g3640 655 Pfam Sulfate permease family 80 460 IPR011547 GO:0016021
Tpr2g3640 655 Pfam STAS domain 512 630 IPR002645 -
Tpr2g3640 655 PANTHER SULFATE TRANSPORTER 16 636 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3640 Tpr-Chr2 39473257 39481149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3640 15 641 Inorganic Solute Cotransporters AT3G15990 66.456 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3640 K17471 - gmx:100787284 1129.78