Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3639 ATGGAACCTAGTACTAGTAGCAACCCTACAGATACCTCAAATTTTGTGGAAATAACAATGGATGTACATGAGGTTGTTCCACCACCACATATGAGCACTGTAAAAAGAGTCAAAACCAAATTCAAGGAAACATTTTTCCCTGATGATCCTATACGCCAATTTAAAGGACAACCACTTAATAAAAAGTTCATCCTTGGAGCTCAATATTTTTTCCCTATTCTCCAATGGTTACCTAATTACAGTTTCGAACTCTTTAAATGTGACCTTATCGCCGGCCTCACCATTGCTAGCTTGGCTATCCCACAGGGAATTAGTTATGCTAAGCTTGCAAGTCTTCCTCCAATTATAGGACTATATTCCAGTTTTGTTCCACCACTAGTTTATGTTGTTCTTGGAAGTTCAAGGGATCTTGCTGTAGGACCTGTTTCTATTGCCTCTCTTGTTTTGGGATCTATGCTTGCAGAGGAAGTATCTCCTAAAACACAACTTGCTCTTTTTATTCAATTAGCTTTTACATCAACTTTTTTTGCTGGTATTTTTCAAGCCGCTCTTGGAATTCTAAGGCTAGGATTTATTATTGATTTTCTATCTAAGGCGATTCTGATTGGGTTTATGGCTGGAGCTGCTATAATTGTGTCTCTGCAACAGCTAAAGAGTTTACTTGGAATCACACATTTTACTAAAGAGATGAGCATTATTCCTGTCATGCGTTCTGTTTTTGACCATATTGACGAGTGGTCATGGGAAACAATAGTTATGGGGGTTTTCTTCTTGGGGATACTTTTGCTTGCAAGACATATTACCATAAAGAAACCAGAACTATTTTGGGTATCAGCCGGAGCTCCTCTTGCCTGTGTCATCATTTCTACCATCCTCAGTTTTGTAATCAAGGGTGAACATCATGGCATTAGTATAATTGGGAAATTGGAACAAGGAATAAATCCTATTACAGCCAAGATGTTGCTTTTTCATGGAAATTATCTTGGTCTAACCATCAAAACCGGGATCGTCACTGGAATTTTATCACTCACTGAAGGAATTGCAGTTGGAAGAACATTTGCCGCTCTTAGAAACTACAAAGTTGACGGAAATAAAGAAATGATAGCAATTGGGCTAATGAATGTGGTTGGCTCTACTACATCTTGCTATGTCACAACAGGATCTTTTTCTCGATCGGCTGTGAATCATAACGCGGGTGCAAGAACAGTGATGTCAAACGTAGTAATGTCCATGACAGTCATGGTGACACTTCTATTTCTTATGCCATTGTTTCGGTACACGCCTAATGTTGTATTGGGTGCAATCATAATAACAGCAGTAATTGGCCTCATTGATATCTCTGCTGCTTATCTCATTTGGAAGATCGATAAATTCGATTTCATTGTGTTGTTGACGGCATTCTTTGGTGTTATCTTCCTCTCTGTCCAATACGGTCTCGCTCTTGCGGTCGGATTGTCAATTTTTAGGATCTTACTGCAAATTACAAGGCCTAAGACAGTGATGTTGGGGAACATACCGGAGACAAACATATATAGAGATCTTCACCACTATAAAGAAGCTATAAGAGTACCTGGTTTTCTTATTCTAAGTATAGAAGCTCCAATCAATTTTGCTAACATAACGTATCTTCATGAGAGGATATTGCGATGGATAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATACCAGAACAGAAAACTTTGGCCTTCGATATGTTATTTTGGAAATGTCAGCTGTTGGTTCCATAGACACAAGTGGAGTTTCACTTTTCAAGGAGTTAAAAGTAGCATTAAAAATGAAGGGTGTCGAGCTTGTATTGGTGAATCCTCTTGCCGAGGTTATTGCAAAGCTGAAAAAAGATGATGAAGCTAATGATTTTATAAGAGCTGATTACCTTTTCTTGACAGTTGGAGAGGCTGTAGCTGCACTTTTATCAACAATGAGGAGTCAATCACCAAGCATGGATGAAGTGTTACATACAATTGTGACTGAGTGA 1998 0.3864 MEPSTSSNPTDTSNFVEITMDVHEVVPPPHMSTVKRVKTKFKETFFPDDPIRQFKGQPLNKKFILGAQYFFPILQWLPNYSFELFKCDLIAGLTIASLAIPQGISYAKLASLPPIIGLYSSFVPPLVYVVLGSSRDLAVGPVSIASLVLGSMLAEEVSPKTQLALFIQLAFTSTFFAGIFQAALGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKEMSIIPVMRSVFDHIDEWSWETIVMGVFFLGILLLARHITIKKPELFWVSAGAPLACVIISTILSFVIKGEHHGISIIGKLEQGINPITAKMLLFHGNYLGLTIKTGIVTGILSLTEGIAVGRTFAALRNYKVDGNKEMIAIGLMNVVGSTTSCYVTTGSFSRSAVNHNAGARTVMSNVVMSMTVMVTLLFLMPLFRYTPNVVLGAIIITAVIGLIDISAAYLIWKIDKFDFIVLLTAFFGVIFLSVQYGLALAVGLSIFRILLQITRPKTVMLGNIPETNIYRDLHHYKEAIRVPGFLILSIEAPINFANITYLHERILRWIEEEEEEEEEEDTRTENFGLRYVILEMSAVGSIDTSGVSLFKELKVALKMKGVELVLVNPLAEVIAKLKKDDEANDFIRADYLFLTVGEAVAALLSTMRSQSPSMDEVLHTIVTE* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3639 665 ProSiteProfiles STAS domain profile. 516 644 IPR002645 -
Tpr2g3639 665 SUPERFAMILY SpoIIaa-like 522 643 IPR036513 -
Tpr2g3639 665 CDD STAS_SulP_like_sulfate_transporter 517 620 - -
Tpr2g3639 665 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Tpr2g3639 665 Pfam STAS domain 517 640 IPR002645 -
Tpr2g3639 665 PANTHER SULFATE TRANSPORTER 21 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr2g3639 665 PANTHER BNAA09G30120D PROTEIN 21 644 IPR030313 -
Tpr2g3639 665 Gene3D STAS domain 496 646 IPR036513 -
Tpr2g3639 665 TIGRFAM sulP: sulfate permease 72 640 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr2g3639 665 Pfam Sulfate permease family 85 464 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3639 Tpr-Chr2 39463144 39467698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3639 17 651 Inorganic Solute Cotransporters AT3G15990 61.732 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3639 K17471 - gmx:100819130 961.829