Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3638 ATGGATGATGAAGTTGTTCAGCGAGTTTTCCACGAAGGAGGACGCGATTACTTCCAACAACAACCTTCAACTTCTTCCTCATCGATTCTCCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATCCAAGAACTACGAGAGAAAAAGGATGGCCTTGTTACAGTTGGCATTGGTGGTCCGAGCGGTTCTGGTAAAACAAGCTTAACAGAAAAGGTGGCATCTGTTTTTGGCTGTACTGTTATATCAATGGAGAATTATTGTGATGGAGTTGACGAAGGGAATGTTCTGGATTCTATAGATTTTGATACCTTAATCAAGAATCTTGAGGATTTGACAAAAGGCAATGATACATTAGTTCCAGAGTTTGATTATCAGCAAAAGAGACGTGTTGGTTATAAAAAAATAATGAGTGCTTCATCTGGGGTGGTAATAGTTGATGGTACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGATATTCGAGTTGCAGTGGTTGGTGGTGTTCATTTTAGCCTACTTTCTAAAGTTCGGTATGACATTGGAGATTCTTGTTCACTGGATTACCTAATAGATAGCATTTTTCCATTATTTAGGAAGCACATCGAGTCAGATCTTCATCATGCTCAGATCAGAATTAACAACAGCTTTGTGTCATCATTTAGAGAGGCAATCTACAAGGTCAAATGCAGAAGCAAGTCTTCAGATGAACATCCAGGTTCTTCCTTGCAAGGAAATCAAGCTCAAACAGATAATTTTATTGAAATGTACCTTAGACCACCTTCGGCTAGTGAAGAAGCAGGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGGTACTATTTATCCCTTGGTGACCAGAGGATTGTTGACAAAAATTTCATCATCCGGCCGAAAGCTGAGTTTGAGGTTGGACGAATGACGTTGGGCGGGTTGCTGGCTCTTGGATACATTGTTGTGGTTAGTTATAAACGCGCATCCACAACTGTCAATTATGGCAAGGTTTCAATGTCATTTGAAACCATTGATGTTCTTGGCGAGACATTCATGGTCATGAGAGGAACCGATAGGAAGACTGTTGGAAAGGAAGCATTGAGGATGGGTATCAATGGACCTTGGATTACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCCCGTCTTAGTACACCACCACTTGTGTCTAATACAACTGTGGCTGGCAGTAGAGAAACAGCAATAGTTGCACCAAAGCCAATTCGTGTTACCACTAATCTTGTTACCGGGCTTGAGGATTTATCTCAGCCATGGACTCGATCCCCAACTAAATCAAAAACCGAACCTTTTGTGGCTACCTGGCATTTCACGTCTTCAGATTCCTCCCATCATGACAACACAGTCCTAGACCCCTCTTCTTTCAGGGACACCGTTAAGCTTGCTCCAATGCCTGATTCATATGACCTGGATAGGGGATTGCTTTTGGCAGTTCAAGCAATACAAGCTTTGTTGGAGAATAAAGGTGTCCCAGTCATTGTTGGAATTGGTGGTCCAAGTGGGTGTGGGAAGACAAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAATAGTTTCCCTAGAAAGTTATTACAAACAAGTTAAGGATTTTAAATATGATGACTTCAGCTCACTTGATTTATCTTTGCTGTCAAAGAATATTGATGATATAAGAAATGGCCGAAGAACCAAAGTACCTATATTTGACTTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGTGTCTATGCTTTGCATCCTGATATCCGAATATCACTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTAATTTCACGAGTTCAAAGGGATAAGAGTAAAGTGGGGTGTTTTATTTCCCAAAATGAGATCATGATGACAGTGTTTCCAATGTTCCAGCAGCTTATTGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAACGACTTTGACCCTGTGCTTTCTCCCGAGAGTTCACTGTTTGTATTGAAGAGTAACAAAAAAGTAGCTTATCAAGATATTCTAGCAATTCTTGATCCAGCAAAATTTTGCAGTTCAGTGCAGAAGTTTATTGATATTTACATGAGACTTCCTGGGATCCCTTCTAATGGTCAACTGACAGATAGTGATTGTATTCGGGTCAGAATATGTGAAGGCAGATTTGCATTACTGATACGTGAGCCTATCAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTACCACGGTTGCTGGTCTTCTTAACCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTTCAAGATGTCCCTGGTCAATACATTCAGATAAAGGGTGTTTCTAAAGATGCTGTGGCAGCAGCCGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAGAGTTACCTTGAAATAGTTTTGGAAAGACTACCAACAGTAGAGAGAAGTTCTGGTGGGATTAACTTTCAGCAATCAACAAGGCTGCTAGAGATTGTGGACTTTATTCAATCTCAGGGATGTAGCTCTTCTTCAGAATCCTCGTCAAGTAGGGTAGTCTCTCCGATTGAAGGCATTATTGAGGAGATGCAATCAAAGATTAGAAGGCTCGAAAAATGGCTTGCTATAAATACGGTTCTCTGGACATTTCTAATGTCAGCAATTGTTGGTTATTCACTTTATCAAAGGAGGCGTCAATGA 2853 0.4003 MDDEVVQRVFHEGGRDYFQQQPSTSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVFGCTVISMENYCDGVDEGNVLDSIDFDTLIKNLEDLTKGNDTLVPEFDYQQKRRVGYKKIMSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIESDLHHAQIRINNSFVSSFREAIYKVKCRSKSSDEHPGSSLQGNQAQTDNFIEMYLRPPSASEEAGINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTVNYGKVSMSFETIDVLGETFMVMRGTDRKTVGKEALRMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSRETAIVAPKPIRVTTNLVTGLEDLSQPWTRSPTKSKTEPFVATWHFTSSDSSHHDNTVLDPSSFRDTVKLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANIIGCEIVSLESYYKQVKDFKYDDFSSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSKVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILAILDPAKFCSSVQKFIDIYMRLPGIPSNGQLTDSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISITTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGQYIQIKGVSKDAVAAAGSMLKLDGSYTTKSYLEIVLERLPTVERSSGGINFQQSTRLLEIVDFIQSQGCSSSSESSSSRVVSPIEGIIEEMQSKIRRLEKWLAINTVLWTFLMSAIVGYSLYQRRRQ* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3638 950 Gene3D - 514 691 IPR027417 -
Tpr2g3638 950 Gene3D - 699 862 - -
Tpr2g3638 950 CDD UMPK_like 62 224 - -
Tpr2g3638 950 Gene3D - 61 242 IPR027417 -
Tpr2g3638 950 CDD UMPK_like 517 685 - -
Tpr2g3638 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 172 IPR027417 -
Tpr2g3638 950 SUPERFAMILY CYTH-like phosphatases 723 857 IPR033469 -
Tpr2g3638 950 PANTHER URIDINE KINASE 602 941 - -
Tpr2g3638 950 PANTHER URIDINE KINASE 475 601 - -
Tpr2g3638 950 PANTHER URIDINE KINASE 2 418 - -
Tpr2g3638 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 685 IPR027417 -
Tpr2g3638 950 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 602 941 - -
Tpr2g3638 950 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 418 - -
Tpr2g3638 950 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 475 601 - -
Tpr2g3638 950 SMART AAA_5 59 209 IPR003593 -
Tpr2g3638 950 SMART AAA_5 514 658 IPR003593 -
Tpr2g3638 950 Pfam Phosphoribulokinase / Uridine kinase family 106 202 IPR006083 GO:0005524|GO:0016301
Tpr2g3638 950 Pfam Phosphoribulokinase / Uridine kinase family 517 682 IPR006083 GO:0005524|GO:0016301
Tpr2g3638 950 PRINTS Uridine kinase signature 515 532 - -
Tpr2g3638 950 PRINTS Uridine kinase signature 542 553 - -
Tpr2g3638 950 PRINTS Uridine kinase signature 636 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3638 Tpr-Chr2 39440878 39457748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3638 510 673 PRT Gene Family AT1G55810 24.719 7.86e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3638 - - mtr:MTR_4g084660 1722.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3638 2 39440878 39457748 Tpr4g3787 4 43778397 43786064 PCT