Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3634 ATGGCAGTATTACCTACAAATCCATCCAGCTTGGAATTGACCATATCCATCCCAGGTTTTGCTTCTTCACCAACCACTTTTCTCCCCTCATCAACCGTGAAAAAGTTGGACATGAATCGAGTAGCCATAGAAGAAGAATGGATGGAAGTAGAAGATGAAGAAGAAAACAGCCTTAATGGAGACACTCCTCGCAAAAAACTTCGTCTCACAAAGGAACAGTCCCGTCTCCTTGAAGAAAAATTCAGAACAAATCACACTTTAAACCCAAAGCAGAAAGAGAGTTTGGCAATGCAGCTGAAGCTCCGACCAAGGCAAGTGGAGGTGTGGTTTCAAAACCGTAGGGCCAGGAGCAAGTTGAAGCAAACAGAGATGGAGTGCGAGTACTTGAAGAGGTGGTTTGGGACTCTGACAGAACAAAACCAAAGGTTACAAAGAGAAGTTGAGGAACTGAGAGCTATGAAAGTGGGTCCACCCACTGTGTTATCCCCTCACAGTTGCGACCCACTTCCAGCTTCAACACTATCTATGTGTCCCCGATGTGAGCGTGTCACCACCAACACCGCCGACAAATTTCTCACCGACGCTGTCACTTTGTCTCCTAAAGTGTCCACGCCTGCCCTGCATTCGCGTCAAAGTTGA 639 0.4679 MAVLPTNPSSLELTISIPGFASSPTTFLPSSTVKKLDMNRVAIEEEWMEVEDEEENSLNGDTPRKKLRLTKEQSRLLEEKFRTNHTLNPKQKESLAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGTLTEQNQRLQREVEELRAMKVGPPTVLSPHSCDPLPASTLSMCPRCERVTTNTADKFLTDAVTLSPKVSTPALHSRQS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3634 212 CDD homeodomain 63 121 IPR001356 GO:0003677
Tpr2g3634 212 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17 1 195 - -
Tpr2g3634 212 PANTHER - 1 195 - -
Tpr2g3634 212 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Tpr2g3634 212 Pfam Homeobox associated leucine zipper 120 154 IPR003106 GO:0006355|GO:0043565
Tpr2g3634 212 Gene3D - 70 116 - -
Tpr2g3634 212 Pfam Homeodomain 64 118 IPR001356 GO:0003677
Tpr2g3634 212 SUPERFAMILY Homeodomain-like 55 121 IPR009057 -
Tpr2g3634 212 SMART halz 120 163 IPR003106 GO:0006355|GO:0043565
Tpr2g3634 212 SMART HOX_1 62 124 IPR001356 GO:0003677
Tpr2g3634 212 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Tpr2g3634 212 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3634 Tpr-Chr2 39417146 39421644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3634 33 184 Homeobox Transcription Factor Family AT1G70920 60.000 9.54e-54 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr2g3634 Homeodomain 9.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3634 K09338 - gmx:100775341 321.627