Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3631 ATGTCTTCCAGTGAGATCACACAAATGGAAGAAGGTGATCTTAAGGCAGAAGCACAAGCACAAAGGGATTCTAGTTTTTGCGGTTCTCCTGAAGTAGTTCAAATCATACAAAAGGTAATAGCAGAGGTGATAGGAACATACTTCTTAATTTTTGCAGGTTGTTGCGTAGTGGTTCTTAATAAATCAGAAGAGACTAAAGGGACAATAACATTTCCTGGAATTTGTGTAACATGGGGTCTATCAGTTATGATCTTGGTTTATTCTCTCGGTCACATTTCGGGTGCTCATTTCAATCCAGCGGTTACAGTTAGCTTCGCCATCTATCGGCATTTCCCACTAAAAGAGGTGCCATTGTATATTGTTGCACAAGTGGTAGGATCTGTTCTTGCTAGTGGAACATTGTACCTTCTGTTTGATGTAGATGAAGAATCTTTTTTCGGAACAACACCAGCAGGATCTAATATGCAATCTCTTGTGTTTGAGATACTCACATCATTTCTCTTGATGTTTGTTGTATCTGCAGTTTCCACAGACAATAGAGCTATTGGAGAATTAGCAGGGATTGCTGTTGGTATGACAATTGTTGTAGATGTCTTGGTTGCAGGGCCTGTGTCAGGTGCATCTATGAACCCAGCTAGAACTCTTGGGCCAGCTTTGGTGATGCATAATTACAAGGGATTTTGGGTTTATGTTGTTGGACCCTTTGTTGGTTGCATATTAGGTGCCTCAGCCTACAACTTGATTAGATTCACAGATAAACCACTTAGGGAATTAAGCCAAAGCTCAAGCTTCCTCGGAAGAAGCTTTCGGTAG 813 0.4096 MSSSEITQMEEGDLKAEAQAQRDSSFCGSPEVVQIIQKVIAEVIGTYFLIFAGCCVVVLNKSEETKGTITFPGICVTWGLSVMILVYSLGHISGAHFNPAVTVSFAIYRHFPLKEVPLYIVAQVVGSVLASGTLYLLFDVDEESFFGTTPAGSNMQSLVFEILTSFLLMFVVSAVSTDNRAIGELAGIAVGMTIVVDVLVAGPVSGASMNPARTLGPALVMHNYKGFWVYVVGPFVGCILGASAYNLIRFTDKPLRELSQSSSFLGRSFR* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3631 270 TIGRFAM MIP: MIP family channel proteins 41 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g3631 270 CDD MIP 37 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g3631 270 Pfam Major intrinsic protein 33 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g3631 270 PANTHER AQUAPORIN NIP2-1 8 265 IPR034294 -
Tpr2g3631 270 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g3631 270 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g3631 270 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g3631 270 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g3631 270 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g3631 270 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g3631 270 Gene3D Glycerol uptake facilitator protein. 2 262 IPR023271 -
Tpr2g3631 270 PANTHER AQUAPORIN NIP4-1 8 265 - -
Tpr2g3631 270 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Tpr2g3631 270 SUPERFAMILY Aquaporin-like 34 258 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3631 Tpr-Chr2 39379371 39381479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3631 1 265 Major Intrinsic Protein MIP AT5G37820 63.019 6.06e-121 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3631 K09874 - gmx:100819179 390.578