Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3626 ATGGATGATTACTACAATATTCTTGGTGTTAGTTCAGATTCTTCTATTGATGAAATAAGGCGTGCCTATAGAAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACAAGAACACCTTCTTTATTAAGTGAAGCCAAATGTAATTTTCAGAAAATTCAAGAAGCTTATTCAGTGTTATCTGATCCCAAAAAAAGAACTATGTACGATGCAGGCTTGTATGATCCTAATGGGGAAGAAGATGAGGAATTTTCTGATTTTGTGGATGAAATGGTATCCCTTATGGCAGAAGTTAGGCGAGAGGAAAAGGTTTATGGTTTGGAGGAGTTGCAGGGCATGTTCATGGAAATGGCAGAAGGATTTGAGTATCCTTCAATGTATTATGGGACAACATCGATAATTGATGAATCCTCTTGTGCTAAGAGAGGAAGTGTTTTGACACAATAG 444 0.3784 MDDYYNILGVSSDSSIDEIRRAYRKLAMQWHPDRWTRTPSLLSEAKCNFQKIQEAYSVLSDPKKRTMYDAGLYDPNGEEDEEFSDFVDEMVSLMAEVRREEKVYGLEELQGMFMEMAEGFEYPSMYYGTTSIIDESSCAKRGSVLTQ* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3626 147 Pfam DnaJ domain 3 69 IPR001623 -
Tpr2g3626 147 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Tpr2g3626 147 ProSiteProfiles dnaJ domain profile. 3 72 IPR001623 -
Tpr2g3626 147 CDD DnaJ 3 61 IPR001623 -
Tpr2g3626 147 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 140 - -
Tpr2g3626 147 SMART dnaj_3 2 64 IPR001623 -
Tpr2g3626 147 PRINTS DnaJ domain signature 5 23 IPR001623 -
Tpr2g3626 147 PRINTS DnaJ domain signature 23 38 IPR001623 -
Tpr2g3626 147 PRINTS DnaJ domain signature 44 64 IPR001623 -
Tpr2g3626 147 SUPERFAMILY Chaperone J-domain 2 75 IPR036869 -
Tpr2g3626 147 PANTHER PUTATIVE, EXPRESSED-RELATED 4 140 - -
Tpr2g3626 147 Gene3D DnaJ domain 1 118 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3626 Tpr-Chr2 39338487 39339909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3626 4 70 C2H2 Transcription Factor Family AT1G74250 50.000 1.96e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3626 - - gmx:100306079 218.009