Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3620 ATGAGAAAAACAAAGTCCCTTTCCTTTCAATTCTTAGCAATAACATGTGTTTTCTTGCTTCACTTTCAATCCATCATAATTCATGCACAAGACCATATAGCAACTTCAGAATATGAAGCACTAGGCCTAACAACAGAACCAAAGAGAGAAACACTAGAAATCATCATCGGCATCGGCGGAGGTGGCGGTTCTTCCCCCGCTCCTTCACCTGAACCAAACTGTCCTCCTCCTCAAACTCCCCCACCGCGCCCCACCTACAGACTAGAAAGGGCCCGCCGGGTACTTATCGAATTCGCTAAAACTGTCAAGCCAAATAAGATCACTGCAACCTGGATTGAGTCAAATAAAGATACATGTAACCAATTTACCGGAATCCTTTGTGGCAAATACCCAACGGATGGCCAAAAAGCAGTTGCTGGATTGGACTTAAACCAAGGAAGACTCTCAGGTAAAACCTGTGACAATATACCATTAACCGGTCTCTTAGACAAATTAGAAGAGTTAACATTCTTCCATGTAAACTCCAACAACTTCTCAGATAAAATCCCAACACAAATCCTTAAATTCCCTTATTTCTACGAACTTGACCTTAGTAACAACAAATTTGTCGGCGTGTTTCCGGAAGTAGTTATTCAAGCTACAAATCTAGTTTTTCTAGACCTCAGGTTCAACAATCTACAAGGTCCTATTCCATCAGACCTATTTAAAAAGGATCTTGACGTAATTTTTGTCAACAACAACAAATTCACCGGAAATTTACCTGCGAATTTCGGGTCTACCCCTGCAAGGTACTTAACATTTGCACGTAATCAATTAACAGGTGAAATTCCTAGAAGTATCGGCGGTGCTTCGAAAACTTTAACTGAAGTGCTTTTTTTAGGGAATAAATTTGAAGGATGTTTACCATTTGAAATTGGGTATCTGAAAAAAGCAACAGTTTTTGATGTTAGTGAAAATTCATTAACTGGGCCTATTCCAGCTTCATTTGGTTGTTTGGAAAAGATTCAGTTTTTGAATTTGGCAACAAACAAATTCTATGGTACTGTTCCTGAAAGTGTTTGTGTTCTACCTGGGATAAAAAACAATGGAAATTTGTCTTTGTCGAATAATTATTTCACTGCAATTGATCCAGCATGTTGGATTTTGTTGAAATCTAAGATATTGGATGTTAATAACAATTGCATTCCTGGGCTTCCTAATCAAAGATCAAAGAAAGATTGTTATGATTTTCAATGTAAAGTGAAGCCGTGTTCGAATCATCAGAGTCTGAGTTATGTTCCTTGTAAGACACGTTGGGGAGCTAAACAGGACACTGCTCCTGTTTCTCAAGAAATGGCTACTGAGCCTGTTACTTACAAGTCTCTCAAACCTCATCATCGGTTGAGAATGTGA 1392 0.3886 MRKTKSLSFQFLAITCVFLLHFQSIIIHAQDHIATSEYEALGLTTEPKRETLEIIIGIGGGGGSSPAPSPEPNCPPPQTPPPRPTYRLERARRVLIEFAKTVKPNKITATWIESNKDTCNQFTGILCGKYPTDGQKAVAGLDLNQGRLSGKTCDNIPLTGLLDKLEELTFFHVNSNNFSDKIPTQILKFPYFYELDLSNNKFVGVFPEVVIQATNLVFLDLRFNNLQGPIPSDLFKKDLDVIFVNNNKFTGNLPANFGSTPARYLTFARNQLTGEIPRSIGGASKTLTEVLFLGNKFEGCLPFEIGYLKKATVFDVSENSLTGPIPASFGCLEKIQFLNLATNKFYGTVPESVCVLPGIKNNGNLSLSNNYFTAIDPACWILLKSKILDVNNNCIPGLPNQRSKKDCYDFQCKVKPCSNHQSLSYVPCKTRWGAKQDTAPVSQEMATEPVTYKSLKPHHRLRM* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3620 463 Gene3D Ribonuclease Inhibitor 262 426 IPR032675 -
Tpr2g3620 463 Gene3D Ribonuclease Inhibitor 89 261 IPR032675 -
Tpr2g3620 463 MobiDBLite consensus disorder prediction 68 83 - -
Tpr2g3620 463 PANTHER BNAC05G26270D PROTEIN 36 456 - -
Tpr2g3620 463 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 36 456 - -
Tpr2g3620 463 SUPERFAMILY L domain-like 91 395 - -
Tpr2g3620 463 MobiDBLite consensus disorder prediction 61 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3620 Tpr-Chr2 39273107 39275075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3620 87 410 Leucine-rich Repeat extension Gene Families AT3G24480 41.284 1.49e-74 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3620 - - cam:101512430 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3620 2 39273107 39275075 Tpr2g3620 2 39273107 39275075 ECH