Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3603 ATGGAGAAATTGGAGCAAGTTCAATGCTTTGGCCGCAAGAAGAACGCGGTTGCCGTCAGTCACTGCAAGCGTGGCCATGGATTGATCAAGATCAACGGTGTTCCCATCGAGTTGATTGAACCAGAAATCCTCCGGTTCAAGGCGTTCGAACCAATCCTCTTGTTAGGGAAAAGCCGTTTCGCCGGCGTCGACATCCGCACCCGTGTCAAAGGCGGTGGTAAAACTTCTCAGATTTACGCAATCAGACAGAGTATCGCTAAGGCTCTTGTTGCTTTCTACCAGAAGTATGTTGATGAACAGAGCAAGAAGGAAATCAAGGATATTCTTGTTCGTTACGATCGTACTTTGCTTGTTGCTGATCCTAGGCGTTGTGAGCCAAAGAAGTTTGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAATCTTACCGTTGA 432 0.4815 MEKLEQVQCFGRKKNAVAVSHCKRGHGLIKINGVPIELIEPEILRFKAFEPILLLGKSRFAGVDIRTRVKGGGKTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3603 143 Pfam Ribosomal protein S9/S16 11 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Tpr2g3603 143 PANTHER RIBOSOMAL PROTEIN S9 3 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Tpr2g3603 143 ProSitePatterns Ribosomal protein S9 signature. 71 89 IPR020574 GO:0003735|GO:0005840|GO:0006412
Tpr2g3603 143 Gene3D - 1 143 IPR014721 -
Tpr2g3603 143 PANTHER - 3 143 - -
Tpr2g3603 143 SUPERFAMILY Ribosomal protein S5 domain 2-like 6 143 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3603 Tpr-Chr2 39138055 39138824 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3603 5 143 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 86.331 9.77e-88 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3603 K02960 - gmx:100779794 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3603 2 39138055 39138824 Tpr2g3603 2 39138055 39138824 ECH