Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3602 ATGGCAACCAACGAGGATCAAAAGCAAACTGAATCTGGAAGACACGCAGAGGTTGGTCACAAAAGTCTTCTACAGAGTGATGCTCTTTTCCAGTATATTTTAGAGACCAGTGTCTTCCCAAGAGAACATGAAGCCATGAAAGAGTTGAGAGAGGTCACAGCAAAACATCCATGGAACATCATGACAACCTCTGCAGATGAAGGACAATTTTTGAGCATGCTCCTTAAACTTATCAATGCTAAGAATACCATGGAAATTGGTGTCTACACCGGTTACTCCCTCCTTGCCACTGCCCTTGCTCTTCCTGAAGATGGAAAGATTTTGGCCATGGACATTAACAAGGAGAATTACGAATTGGGTCTACCAGTAATTAAAAAAGCTGGTGTTGATCACAAAATTGATTTTAGAGAAGGCCCTGCTCTACCAGTTCTTGATGAATTGATTAAAGATGAAAAAAATCATGGTAGCTACGATTTCATTTTTGTGGATGCTGACAAGGACAATTACCTCAACTACCACAAGAGGTTGATTGATCTTGTTAAAGTGGGAGGTGTGATCGGCTACGACAACACCTTATGGAATGGATCTGTGGTAGCACCCCCTGATGCTCCTCTAAGGAAGTATGTTAGGTATTATAGGGATTTTGTTTTGGAGCTTAACAAGGCTTTGGCTGTGGACCCTAGGATTGAAATCTGTATGCTTCCTGTTGGTGATGGAATCACTATCTGCCGTCGGATCAAGTAA 744 0.4194 MATNEDQKQTESGRHAEVGHKSLLQSDALFQYILETSVFPREHEAMKELREVTAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDELIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITICRRIK* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3602 247 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 246 IPR002935 GO:0008171
Tpr2g3602 247 Pfam O-methyltransferase 36 246 IPR002935 GO:0008171
Tpr2g3602 247 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 1 247 - -
Tpr2g3602 247 PANTHER O-METHYLTRANSFERASE-RELATED 1 247 - -
Tpr2g3602 247 CDD AdoMet_MTases 85 186 - -
Tpr2g3602 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 245 IPR029063 -
Tpr2g3602 247 Gene3D Vaccinia Virus protein VP39 21 247 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3602 Tpr-Chr2 39133409 39135234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3602 5 246 Monolignol Biosynthesis Gene Families AT4G34050 89.256 1.73e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3602 K00588 - gmx:100779260 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3602 2 39133409 39135234 Tpr2g3602 2 39133409 39135234 ECH