Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3595 ATGGCTAACTCAACTAACAAATCTACACCAACAATGTTGTTGGACTCCATGGAACAGAAGGGGAAAAATATTGCTGAATCAAATGCAAGCATAATTCAATGTCCTATAAGCCAGCAATGCCGTAGCACCTTAGATGGTCCAGTATCTATTCTTTGGGATATTGAAAATTGTCCTGTTCCAAGTGATGTACGCCCAGAAGATGTGGCGGGTAATATAAGAATGGCTCTGCAGGTACACCCAGTAATTACAGGAGCTGTTATGATGTTTTCTGCTTATGGGGATTTCAATGCTTTCCCTAGGCGGCTTAGAGAGGGCTGTCAGAGAACTGGTGTTAAACTTATTGATGTTCCCAACGGGAGAAAAGACGCTGCCGACAAAGCAATCTTGGTCGACATGTTCTTATTTGCTCTTGACAATCCCCCACCATCCTCCATCATGCTAATCTCTGGTGATGTTGATTTTGCTCCAGCGCTACACATTCTTGGTCAGCGGGGATACACTATAATTCTTGTCATCCCTGCTGGGGTTGGTGTTTCTTCTGCCCTATGCAATGCTGGTAAATTTGTCTGGGACTGGCCTGTTGTGGCTCGTGGAGAAGGTTTCGTCCCCCCCTCAAAGGCTTTGGCGCCACCCCGTGGTGGTTCAGTTGAGCTTTCTGGATATTTGATGGGGTGCCATATCAATGACAGCACCGATGGACAAAATGAAGAAGAAGCAATAGTTTATAGAGGGATGTCACAAAGCTATTACAACTCGAGGGAATTCTCAGTGGTATCACAATCTCTGTCTGAATATAACTCACCGCATGTGTCTTACTTGCCAACTTCTTTGAGATCATATAGCCTTCCATCTGGATTGAATGATGTTGCTGGAGGACCTGTGCCTTCTAGTGACAATACTGAATGCCAGCTATGGGTACAGCCTGGGGATTTAAATGGTCTCAAGGGTCAGATAATAAGGTTGCTCGAACTTTCTGGAGGATGTCTGCCCTTAGTCCGAGTTCCAGCGGAGTACCAGAAAATTTATGGTAAGCCACTCTTCATATCTGAATATGGGGCATTTAAGTTGGTTGATCTTTTCAAAAAAATGGATGATGCCATTTCTGTGGAAGGGAAAGGGGCTCGCAGATATGTGTATCTCAGAAGCAGGAAGGGAGGATCAGGTGCTCCTCCGTTGTCTCTTGCAAAGAAAGATAAGAAAGGAAAAAGGGAACTGGAAGAGAATGCAAATGTTGTCATTGGTGGCTGCTCTTCGGATGAGTTGTCAGATGAAGAAAGAGTAGTCACAGAAGAACGCGAGGAAAGAAATTTTACCGGCAAGTGTAATAAAGGGAGAGCAGCCAGATGTGAAATTGATGGCCGTGTTCTTGAGCAGTTTAAGTGTGAGCTGCAGGAGATTCTGGTCAGCTATTCCTGTCAGATACTTCTAAGTTGTTTTGAAGCTGTATACCAGCAACGGTACAAGAAACAATTGGAATATCAGATATTTGGCGTGAACAAGTTGGAGGACTTGTTGGAGAAAGTGAGTGACGTGGTAGCATTGCATGAGGATCCAGTAAGCAAGAGGAAATTCTTGGCTGCTATTGGTAGTTAG 1593 0.4444 MANSTNKSTPTMLLDSMEQKGKNIAESNASIIQCPISQQCRSTLDGPVSILWDIENCPVPSDVRPEDVAGNIRMALQVHPVITGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTIILVIPAGVGVSSALCNAGKFVWDWPVVARGEGFVPPSKALAPPRGGSVELSGYLMGCHINDSTDGQNEEEAIVYRGMSQSYYNSREFSVVSQSLSEYNSPHVSYLPTSLRSYSLPSGLNDVAGGPVPSSDNTECQLWVQPGDLNGLKGQIIRLLELSGGCLPLVRVPAEYQKIYGKPLFISEYGAFKLVDLFKKMDDAISVEGKGARRYVYLRSRKGGSGAPPLSLAKKDKKGKRELEENANVVIGGCSSDELSDEERVVTEEREERNFTGKCNKGRAARCEIDGRVLEQFKCELQEILVSYSCQILLSCFEAVYQQRYKKQLEYQIFGVNKLEDLLEKVSDVVALHEDPVSKRKFLAAIGS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3595 530 CDD LOTUS 456 518 - -
Tpr2g3595 530 Pfam NYN domain 48 187 IPR021139 GO:0004540
Tpr2g3595 530 PANTHER LIMKAIN B LKAP 36 525 IPR024768 GO:0005777|GO:0010468|GO:1903231
Tpr2g3595 530 CDD PIN_limkain_b1_N_like 47 173 - -
Tpr2g3595 530 ProSiteProfiles OST-type HTH domain profile. 455 529 IPR025605 -
Tpr2g3595 530 Gene3D - 452 522 IPR041966 -
Tpr2g3595 530 Gene3D - 310 379 IPR041966 -
Tpr2g3595 530 PANTHER - 36 525 - -
Tpr2g3595 530 CDD LOTUS 311 380 - -
Tpr2g3595 530 Gene3D - 48 192 - -
Tpr2g3595 530 Pfam OST-HTH/LOTUS domain 312 378 IPR025605 -
Tpr2g3595 530 Pfam OST-HTH/LOTUS domain 455 518 IPR025605 -
Tpr2g3595 530 ProSiteProfiles OST-type HTH domain profile. 310 382 IPR025605 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3595 Tpr-Chr2 39060231 39063779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3595 44 198 C2H2 Transcription Factor Family AT5G61190 43.871 2.98e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3595 - - gmx:100818186 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3595 2 39060231 39063779 Tpr2g3595 2 39060231 39063779 ECH