Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3594 ATGGCTAACTCAAGTATCAAATCTACGCCAACAATGTCAATGGACTCCATGGAACAGAAGGGGAAAAACATTGCTGAATCAAATGAGAGCATAGATGGTCCAATATCTATCCTTTGGGATATTGAAAATTGTTCTGTTCCAAGTGATGTACGCCCAGAGGATGTGGCGGGTAATATAAGAAAGGCTCTGAAGGTGCATCCAGTAATTGCAGGAGCTGTTATGATGTTTGCTGCTTATGGGGATTTCAATGCTTTCCCTAGGCGACTTAGAGAGGGCTGTCACAGAACTGGTGTTAAACTTATGGATGTTCCCAATGGGAGAAAAGACGCTGCTGACAAAGCAATCTTGCTCGACATGCTCTTATTTGCTCTTGACAACCCCGCACCAGCCTCGATCATGCTAATCTCTGGAGACGTTGATTTTGCTCCAGCACTACACACTCTTGGTCAGCGGGGATACACTATAATTCTTGTCATCCCTGCTGGGGTTGGGGTTTCTTCTGCCCTATGCAATGCTGGTAAATTTGTTTGGGACTGGCCTGTTGTGGCTCGTGGAGAAGGTTTCGTCCCCCCCTCAAAGGCTTTGGCGCCACCCCGTGGAGGTTCAGTTGATCCTTCTAGATATTTGATGGGATGCCATATCAATGACAGCACCGGTGGACAAAATGAAGAAGAAGCAATAGTTTATAGTGGGATGCCACGGAGCTATTCCAACTCGAGGGAATTCTCAGTGGTATCACAATCTCTGTCTGAATATAACTCACCGCACGTGTCTTACTTGCCAACATCTTTGAGATCATATAGCCTTCCATCTGGGTTGAATGATGTTGCTGGAGAATCTGTGCCTTCTAGCGACAATACTGAATGCCAGACATGGGTACAGCCTGGGGATTTAAATGGTCTCAAGGGTCAGATAATAAGGTTGGTCGAACTTTCTGGAGGATGCCTGCCCTTGGTCCAAGTTCCAGCAGAGTACCAGAAAATTTATCGTAAGCCACTCTTTCTATCTGAATATGGGGCCTTTAAGTTGGTCGATCTTTTCAAAAAAATGGATGATGCCATTTCTGTGGAAGGGAAAGGGGCTCACAGATTTGTGTATCTCAGAAGCAGGGAGGATGGATCAGGTGTTCCTCCGCTGTTTCTTGCAAAGAAAGATAAGAAAGGAAAAAAGGCACTGGAAGAGAATGTAAATGCTGTCATTGGTGGCTGCTCTTCGTATGAGAATGAGTTGTCGAATAAGCTTAGTCTGTTGAAATATCTGTCCAGCTCTGATTCTGGTCAGATATTCATGTTTGATATTGATGAGTTGCTTGGTATTGAATATTGA 1326 0.4472 MANSSIKSTPTMSMDSMEQKGKNIAESNESIDGPISILWDIENCSVPSDVRPEDVAGNIRKALKVHPVIAGAVMMFAAYGDFNAFPRRLREGCHRTGVKLMDVPNGRKDAADKAILLDMLLFALDNPAPASIMLISGDVDFAPALHTLGQRGYTIILVIPAGVGVSSALCNAGKFVWDWPVVARGEGFVPPSKALAPPRGGSVDPSRYLMGCHINDSTGGQNEEEAIVYSGMPRSYSNSREFSVVSQSLSEYNSPHVSYLPTSLRSYSLPSGLNDVAGESVPSSDNTECQTWVQPGDLNGLKGQIIRLVELSGGCLPLVQVPAEYQKIYRKPLFLSEYGAFKLVDLFKKMDDAISVEGKGAHRFVYLRSREDGSGVPPLFLAKKDKKGKKALEENVNAVIGGCSSYENELSNKLSLLKYLSSSDSGQIFMFDIDELLGIEY* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3594 441 PANTHER - 29 407 - -
Tpr2g3594 441 CDD LOTUS 298 367 - -
Tpr2g3594 441 Gene3D - 33 179 - -
Tpr2g3594 441 Pfam NYN domain 35 174 IPR021139 GO:0004540
Tpr2g3594 441 Gene3D - 297 366 IPR041966 -
Tpr2g3594 441 MobiDBLite consensus disorder prediction 1 21 - -
Tpr2g3594 441 PANTHER LIMKAIN B LKAP 29 407 IPR024768 GO:0005777|GO:0010468|GO:1903231
Tpr2g3594 441 ProSiteProfiles OST-type HTH domain profile. 297 371 IPR025605 -
Tpr2g3594 441 Pfam OST-HTH/LOTUS domain 299 362 IPR025605 -
Tpr2g3594 441 CDD PIN_limkain_b1_N_like 34 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3594 Tpr-Chr2 39056106 39058939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3594 31 185 C2H2 Transcription Factor Family AT5G61190 44.516 1.58e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3594 - - gmx:100818186 607.06