Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3575 ATGGTAGCAGAAGCCGAAATTCTATGTCAACAAACCATTTCTATGTTGGATGTAAAGTATCATCTTTGCATTGCAAAAGAACACAACGTTAAGGTTGAGAATTCACCTACCTCTCCACAACCTTCTCTTCCAATCTTTGCCCATGCTGTGAGTTGCTCCGAGATCATTAAAGATTCCATGTTGGAGACCCCGGCGAAGATGTTTATCCCAAATGTATGTTCTGGTAGCTATGCCGATATTGGTCCACGGGGATCTATGGATGATGAACACATTCAGATAGATGATCTAGCTTGTCACCTTGGATTTGTGTTCAAGTACGCGATACCAAGTGCGTTTTATGCAGTTTTTGATGGGCATGGTGGGTCTGAAGCGGCTTCTTTTGTTAAGAGGAATGCTATGAAGTTATTTTTTGAAGATGCTGATATGCTACAATCATATGATACTGATGGGTGTTTTTTCGAGAAGCTGGAGGACTCTCATAGGAGAGCTTTTGTACAGGCAGATCTTGCGTTGGCACATGAACAAAGTGTTAGTAGTTCATGTGGGACTACAGCAATTACTGCCCTTGTACTTGGAAGACATTTGCTTGTTGCTAATGCCGGTGACTGTCGAGCAGTTCTTTGCAGGAGAGGTGCAGCTGTTGAGATGTCTCAAGATCACAAACCAAGTTATTTACCTGAACGAAGGAGAGTGGAGGAGATAGGCGGCTACATTGATGATGGGTATCTTAACGGTTATCTCTCGGTAACTCGTTCCCTCGGGGATTGGGACTTAAAATTTCCACTCGGTGCTGCATCTCCTCTTATTGCTGAGCCAGATGTTCAACTGGTTACATTGACAGAAGAGGATGAGTTCTTGATCATTGCGTGTGATGGGATTTGGGATGTAATGTCTAGCCAAGTTGCAGTTAGTCTTGTTCGCCGTGGATTAAGAAGGCACAACGACCCACATCAAAGTGCCAGAGATCTAGTCAAGGAAGCACTGCGCCTGAATACATCCGATAATCTCACTGTGATAGTTATATGTTTGTCACCTGTTGAAAACTTTGCTGAATCGTGTCCACCTCAAAGGCGAAGATTCAAAGCTTGCAGTATTTCTGAAGAGGCTCGTAATAGATTGAAGAGCTTGATAGAGGGAAATTGA 1143 0.4339 MVAEAEILCQQTISMLDVKYHLCIAKEHNVKVENSPTSPQPSLPIFAHAVSCSEIIKDSMLETPAKMFIPNVCSGSYADIGPRGSMDDEHIQIDDLACHLGFVFKYAIPSAFYAVFDGHGGSEAASFVKRNAMKLFFEDADMLQSYDTDGCFFEKLEDSHRRAFVQADLALAHEQSVSSSCGTTAITALVLGRHLLVANAGDCRAVLCRRGAAVEMSQDHKPSYLPERRRVEEIGGYIDDGYLNGYLSVTRSLGDWDLKFPLGAASPLIAEPDVQLVTLTEEDEFLIIACDGIWDVMSSQVAVSLVRRGLRRHNDPHQSARDLVKEALRLNTSDNLTVIVICLSPVENFAESCPPQRRRFKACSISEEARNRLKSLIEGN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3575 380 CDD PP2Cc 74 343 IPR001932 -
Tpr2g3575 380 Pfam Protein phosphatase 2C 83 335 IPR001932 -
Tpr2g3575 380 SUPERFAMILY PP2C-like 67 345 IPR036457 -
Tpr2g3575 380 SMART PP2C_SIG_2 88 343 IPR001932 -
Tpr2g3575 380 ProSitePatterns PPM-type phosphatase domain signature. 112 120 IPR000222 GO:0043169
Tpr2g3575 380 Gene3D - 62 348 IPR036457 -
Tpr2g3575 380 ProSiteProfiles PPM-type phosphatase domain profile. 73 343 IPR001932 -
Tpr2g3575 380 SMART PP2C_4 63 341 IPR001932 -
Tpr2g3575 380 PANTHER PROTEIN PHOSPHATASE 2C 1 367 IPR015655 GO:0004722|GO:0006470
Tpr2g3575 380 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3575 Tpr-Chr2 38923602 38925860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3575 1 379 PP2C-type Phosphatase Gene Family AT1G48040 55.128 1.35e-140 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3575 K14803 - gmx:100775577 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3575 2 38923602 38925860 Tpr2g3575 2 38923602 38925860 ECH