Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3567 ATGATGGCTCAAACCAGAAATCACATTCAGAATCGGAACCAACAATTAGAGCTTGGTGAGATACTAGGTGAAGCGCAACATCGCTGGCTCCGACCTGCTGAAATATGTGAGATACTTCGCAATTACCGGAAGTTTGAGTTAACACCAAATCCACCTGTTAGGCCTCCTGCTGGGTCACTATTCTTGTTTGATCGAAAAGTACTCCGTTACTTTCGCAAGGATGGTCACCGGTGGAAGAAGAAAAAAGATGGCAAGACTATAAGAGAAGCTCATGAAAAGCTGAAGGCTGGTAGCGTTGAGGTCTTGCATTGTTACTATGCTCGTGGCGAGGATAATGAAAACTTTCAAAGGAGAATTTATTGGATGCTTGATGAGAAGTTAGAGCACATTGTCCTAGTGCATTATCGGGAAATTGAAGAGGGCTGCAAGTCTGGCATCTCAAATTTGCCTGCAGTTCCAGTAACCCCGGTTGGTAGCTCTCAGAGTAGCTCAGTGCCTTCCTCTGCCAAAATAAGCTCACCAATATCTGTTGTTCAAGTATCTTTGACATCAAGTGCGAATGAAATTGATCAGCACAGAGCTTCTGAGTATGAGGATGACAAGTTACAGAATTGTCCTCAAGTCTCCTCTCATGCTCAATCTACCAGCAATTCCATGCATCATTGTGCACCTCAGCTTTCACTTGAAGCTACTGGGTTTTCTGAGTTATTGAAGAACCCCTTTATTTCATCACGGACATCTCTTCCTTGCTTTTCTCCTAGTAATGACGTGCCTCCCTGGGCATTCATTCAGAACTCTAGCAGAAATGGAATTAATATGTATGATAGAGAACTTCATGTTCAAGGATCAAGTGACGGCTCAGAAGCTTATTTTACTGTTGCAGAAAGTAATGCAATGTTAGATGCTATTTGCAGGACCCAAGATGGTGTAATTTTAAGAGATAGGCCCATCACTGACGTGTATATGCACCCTATTATTACAGGAACTTCACAGACTGTTAATCAGCAAGTGAAAAAGGAGCATGATCTAGGCTCATTTCATACCCCATTCAGTGATCATCCAGTTTTTGCTCCTCAAGACGGTGGTGCATACAAAGATGAGTTGGAACATGTTGAGTTTGCGGAATTGAAGAAGCTTGATAGTTTCGGACAGTGGATGGATAAGGAGATTGGTGGAGACTGTGATAATTCCTTTATGGCTTCAGATTCTGGCAATTATTGGAATACACTTGATGCTGATAACAAGGATAAGGAGGTGTCTAGGTTACGCCAGATGCAGTTGGATGTGGATTCATTAGGCCCTTCTCTTTCCCTAGAACAGCTATTTAGTATCCACGACTTTTCTCCAGATTGGGCATATGCTGGGGTTAGAACAAAGGTTTTAATAGTTGGCACATTTCTGGGGAGTAAAAAGCTTTCTGGTGAGACCAAATGGGGATGTATGTTCGGCGAAATTGAGGTTTCTGCTGAAGTTTTGGCAGAGAATGTCATACGCTGTCAGACTCCTTTGCATTCACCTGGTCGTGTTCCATTCTATGTTACATGCAGTAATCGGTTAGCCTGTAGTGAGGTCAGAGAATTTGAATATCATGACAATCCATCAAAATTTATAGGTCCCAATGGTGTTAAAATCTCACCAGAAGATGAGGTACAACTTCAAATTCGACTTCTTAGACTAGTAGAACTGGAACCTGACAACAAGTGGTTCAAGTGCTCTGTTCCCGAATGTGAAAAATGTAAACTTATGGAAACAATGTATTCCATGAGAGATGATAATGGAGTATTTGGAGAAACTTTCAAGATTGATGGAAGTGATCACAATAACACTAGAGATGTACTGTTTCAAAGATTAATCAGAGACAAGCTTTATGGCTGGTTGGAATTTAAGGTTCATGAAGGAGGAAAAGGACAACATATATTGGATAATGAAGGCCAAGGAGTCATACATTTGGCAGCTGCACTTGGATATGTATGGGCTCTGGGGCCATTAGTTGCCGCTGGTATCAGTCCTAACTACAGGGATGCTCATGGAAAAACAGGACTTCACTGGGCTTCATATTTTGGGAGAGAAGAAACGGTAATTGCGTTAGTCAAATTAGGAGCATCCCCAGGGGCCATTGAGGATCCAACATCAGCGTTTCCTCGAGGACAAAAAGCAGCCGATTTAGCTTCAAGTAGAGGACATAAAGGAATTGCTGGGTATTTGGCTGAAGCAGATCTAACAACTCAATTGTCTATGTTGACTGTCAATGAAAATGATATGCACAACATTGCCACAACTACAGCAGCTGACAGTATTTTTGAGTCTGCTGACGGTGACTCGTCATATCTGACTATGGATGAGCAGCACGGTCTGAAAGAGTCACTTGCTGCTTTCCGAAAATCAGCCCATGCAGCTGCTTTGATCCAAGAAGCCTTTAGGGCAAAATCATTTTGTCAAAGACAATTAACCAAGAGTAGTGATGATATCTCTGAAGAAGTACTTAATGTAGTCTCTGATTCTTTGAACAAGGTTCAGAAGATAGGCCACTTCGAGGATTATTTACATTTTGCAGCTTTAAGGATTCAAAAGAAATATCGTGGGTGGAAAGGAAGAAAAGATTTTTTGAAAACACGCAACCGCATAATAAAAATTCAGGCTCATTTTAGAGGACACCAAGTTCGCAAGCAGTACAAAAAAGTTATTTGGTCTGTTAGCATCGTAGAAAAGGCAATACTGCGTTGGAGGCGGAAAGGAGCTGGTCTGCGAGGGTTCCGGGTTGGGCAGCCGGTTGGTATCATGGCAAAAGATGCTGAGAATAGTGACGACGAGTATGACTTTCTTAGCATTGGACGGAAACAGAAATCAGATGATGTAAAGAAAGCTCTTGATAGAGTTAAGTCCATGGTTCGTAATCCAGAGGCAAGGGATCAATATATGAGGCTAATCATGAAATATCAGAATTTTAAGATTGATTATGGCGGAACCAGTCAATCACAGCATGTTGACTAG 2991 0.4186 MMAQTRNHIQNRNQQLELGEILGEAQHRWLRPAEICEILRNYRKFELTPNPPVRPPAGSLFLFDRKVLRYFRKDGHRWKKKKDGKTIREAHEKLKAGSVEVLHCYYARGEDNENFQRRIYWMLDEKLEHIVLVHYREIEEGCKSGISNLPAVPVTPVGSSQSSSVPSSAKISSPISVVQVSLTSSANEIDQHRASEYEDDKLQNCPQVSSHAQSTSNSMHHCAPQLSLEATGFSELLKNPFISSRTSLPCFSPSNDVPPWAFIQNSSRNGINMYDRELHVQGSSDGSEAYFTVAESNAMLDAICRTQDGVILRDRPITDVYMHPIITGTSQTVNQQVKKEHDLGSFHTPFSDHPVFAPQDGGAYKDELEHVEFAELKKLDSFGQWMDKEIGGDCDNSFMASDSGNYWNTLDADNKDKEVSRLRQMQLDVDSLGPSLSLEQLFSIHDFSPDWAYAGVRTKVLIVGTFLGSKKLSGETKWGCMFGEIEVSAEVLAENVIRCQTPLHSPGRVPFYVTCSNRLACSEVREFEYHDNPSKFIGPNGVKISPEDEVQLQIRLLRLVELEPDNKWFKCSVPECEKCKLMETMYSMRDDNGVFGETFKIDGSDHNNTRDVLFQRLIRDKLYGWLEFKVHEGGKGQHILDNEGQGVIHLAAALGYVWALGPLVAAGISPNYRDAHGKTGLHWASYFGREETVIALVKLGASPGAIEDPTSAFPRGQKAADLASSRGHKGIAGYLAEADLTTQLSMLTVNENDMHNIATTTAADSIFESADGDSSYLTMDEQHGLKESLAAFRKSAHAAALIQEAFRAKSFCQRQLTKSSDDISEEVLNVVSDSLNKVQKIGHFEDYLHFAALRIQKKYRGWKGRKDFLKTRNRIIKIQAHFRGHQVRKQYKKVIWSVSIVEKAILRWRRKGAGLRGFRVGQPVGIMAKDAENSDDEYDFLSIGRKQKSDDVKKALDRVKSMVRNPEARDQYMRLIMKYQNFKIDYGGTSQSQHVD* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3567 996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 843 898 IPR027417 -
Tpr2g3567 996 Gene3D Immunoglobulins 437 535 IPR013783 -
Tpr2g3567 996 Pfam IQ calmodulin-binding motif 851 868 IPR000048 GO:0005515
Tpr2g3567 996 Pfam IQ calmodulin-binding motif 873 892 IPR000048 GO:0005515
Tpr2g3567 996 ProSiteProfiles CG-1 DNA-binding domain profile. 18 144 IPR005559 GO:0003677
Tpr2g3567 996 CDD IPT 443 531 - -
Tpr2g3567 996 ProSiteProfiles Ankyrin repeat region circular profile. 676 702 - -
Tpr2g3567 996 Pfam IPT/TIG domain 444 529 IPR002909 -
Tpr2g3567 996 SMART CG_1_2 21 139 IPR005559 GO:0003677
Tpr2g3567 996 Gene3D - 613 741 IPR036770 -
Tpr2g3567 996 ProSiteProfiles Ankyrin repeat profile. 676 708 IPR002110 GO:0005515
Tpr2g3567 996 SUPERFAMILY E set domains 444 529 IPR014756 -
Tpr2g3567 996 SUPERFAMILY Ankyrin repeat 634 738 IPR036770 -
Tpr2g3567 996 Gene3D - 846 895 - -
Tpr2g3567 996 SMART iq_5 870 892 IPR000048 GO:0005515
Tpr2g3567 996 SMART iq_5 847 869 IPR000048 GO:0005515
Tpr2g3567 996 Pfam CG-1 domain 24 137 IPR005559 GO:0003677
Tpr2g3567 996 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 20 974 - -
Tpr2g3567 996 ProSiteProfiles IQ motif profile. 871 899 IPR000048 GO:0005515
Tpr2g3567 996 ProSiteProfiles IQ motif profile. 848 877 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3567 Tpr-Chr2 38814106 38821967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3567 15 992 CAMTA Transcription Factor Family AT5G64220 39.255 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Tpr2g3567 CG-1 2.2e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3567 K21596 - gmx:100818336 1483.39