Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3560 ATGGAGTTAACTCCAAGAGGAAGAAATAATTTAACTCCAAGAGGAAGAAATCAAGGTCATGTTGTGACTTTTGAAAGAGATGCAGATTCATTTGTGGAGGAAGATAAAGAGCTTCAATCTAAATGGGCTGCTATAGAGAAATTACCAACTTTTAAAAGGATTAAAACTTCTTTTGTTGATGAAATCACTCAGGAGGAAAATGGTAGTAGATGGCAAAGAAGTAGTAGTAAAAGGGTTGTTGATGTTACTAAACTTGGAGCTGTGGATAAGCGTTTGTTTATTGATAAGCTTATAAAGCATATTGAGAATGATAATCTCAACTTACTTCAGAAACTTAGAGAAAGGATGGAAAGAGTAGATGTGAAGTTACCTAGTGTGGAAGTGAGGTACAAGAATCTGAATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTCCCTACTCTATGGAACTCTTTTTCTAGCTTATTTTCGGGTTTAGTGAAGACTATATATTGCAATTCTCAAGACACCAAGATGAGCATTCTGAAAGATGTCAGTGGCATCATAAAACCATCAAGGCTTACTCTTCTTCTCGGTCCACCTAGCTGTGGGAAAACTACCTTGCTAATGGCACTGGCTGGAAAATTAGAGCAATCTCTCACGGTTTCTGGAGAAATCAGTTTCAATGGTCACAGGCTAGATGAATTTGTTCCTCAAAAAACATCAGCATACATAAGCCAGTATGACCTGCACATTCCTGAGATGACAGTGAGGGAAACAATCGACTTCTCGGCACGCTGTCAGGGGGTTGGTAGCAGAGCTGATATTATGACTGAAATCACCAGGAAAGAAAAAGAACAAGGAATCTTCCCTGACCCGGATATTGATACCTATATGAAGGCTATTTCAGTTGAAGGACAGAGCGAAAATCTTCAGACAGAATATGTTTTAAAGATACTTGGATTGGATATTTGTGCGGACACACTTGTTGGAGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTAGGTCCCATAAAAGCACTTTTTATGGATGAAATATCAACTGGCTTAGACAGCTCCACTACTTTTCAAATAGTTACATGCCTCCAGCAATTGGTGCACATCACAGATGCAACAGCAGTGCTTTCACTCCTCCAACCAGCACCGGAAACCTTTGAGTTATTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCTGCAATCAAGCAATCCAATTCTTTAGGGATTGCGGTTTCTGGTGCCCTGAAAGAAAAGGAGTGGCAGACTTTCTTCAAGAGGTAACCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCACAGATATTCCTTACAGTTATGTTTCAGTGGATGACTTCTCTGAGATCTTCAAAACAAGTTACTGGGGAAGAATGTTAGATGATGAGCTTTCAAATCCATATGATAAATCTCAATCTCATAAAAGTTCTTTATCATATAGCAAGTACTCATTGGGAAAATTGGATTTGTTTAAAGCTTGTATGAAGAGGGAGATTCTTCTGATGAAAAGAAACTCGTTTATCTATATATTCAAAACTGTGCAGCTTACAATCACTGCAATCATAACAATGACGGTTTTCTTGCGCACACAGCTCGATGTGGACTTGTTAGGATCAAACTATTTATTAGGTTCATTGTATTATACACTTGTACGTCTCATGACGAATGGAGTTGCCGAGTTGATCATGACGATTACTAGACTCCCAGTTGTTTATAAGCAGAAAGCATTCTATCTGTATCCAGCTTGGGCTTATTGTCTTCCAGCTGCAATTCTAAAGATTCCATTTTCGGTTCTTGATTCTCTTGTTTGGACATCAATAACATATTATGTTATAGGCTACAGCCCAGAAATAACAAGGTTCCTCCGCCAGTTTCTTTTGCTTATCTTTCTGCATATGTCATCAACATCCATGTGCCGTTCGCTTGCTGCTGTTTTTAAAACTGATGTTGCTGCGACAACTGTTGGTTCCTTGGTCTTAGTACTCATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTGCCAAAGTGGTTGAGATGGGGTTTTTGGCTTTCTCCCATGTCATATGGGGAAATAGGAATAACACTCAATGAATTTCTTGCTCCCCGCTGGCAAAAGATCCAAGATGGAAACATCACCGTTGGAAGGGAAATTCTCAAGAGTCGTGGTTTAGACTTTGATAGCAACTTCTTCTGGATATCGATTGGAGCATTACTTGGTTTCACAGTAGTATTTGATATTCTATTTGTCGTAGCATTAACTTACTTAAAAGAGCCTAAGCAATCTCGAGCTTTAGTTTCGAAAAAGAGGCTGCCCCAACTAAAAGCAGGAGAAAAAAACAATGAAGTGGAATTAAAAAATAAGTCAGTAGCAGTTGATATTAGCCACACATCAAAGGAAACTCAAAACACAGGGAAAATGGTTCTTCCTTTTTTGCCACTGTCAATAGCATTTAATGATGTCCAGTATTTTGTCGACACTCCTCCGGAGATGAAAAAACATGGTTCGAACGAGAAAAATCTACAATTGCTCTGCGATATCACTGGTGCCTTTAGGCCAGGAATTCTTACTGCACTGATGGGAGTCAGTGGAGCAGGGAAGACAACACTCATGGATGTTCTTTCAGGAAGAAAAACTGGAGGAATCATTGAAGGAGATATAAGAATTGGAGGGTACCCTAAAGTGCAAAAGACATTTGCAAGAGTTTCAGGTTACTGTGAGCAAAATGACATACATTCTCCATATATAACAGTTGAAGAATCTGTTCGATACTCGGCTTGGTTGCGGTTACCGAGGGAGATTGATTCAGCAACAAAAGGGAAATTTGTGGAAGAAGTACTTGAAACAATTGAACTTGATGATATAAAGGATAGTTTAGTTGGCATTACTGGCCAAAGTGGATTATCAACAGAGCAACGTAAAAGACTAACCATTGCAGTGGAGCTTGTCTCGAATCCATCAATAATTTTTATGGATGAACCTACATCAGGTTTGGATGCGCGAGCTGCAGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGTAGGACCACGGTTTGCACTATACATCAGCCAAGCATTGATATATTTGAGACTTTTGATGAGTTGATTCTTATGAAATCCGGAGGAAAGATCATTTATAATGGACTGCTAGGCCATCATTCAAATAAGCTGATTGAATATTTTCAGAGTATACCGGGAGTTCCAAAGATCAAAGACAATTATAATCCTGCAACATGGATGATGGAAGCTACCTCAGCAGCTGTAGAAGACGAACTTAAAATCGATTTTGCTAATATATACAAAGAGTCGCCCCTTCACCGGGAAACCCTTGAAATGGTGAGAGTGTTAAGTGAACCAGAGCAAGGTTCAAAAGACTTGCACTTTTCAACTCGCTTCCCACAAAATTACTTGGGGCAGTTTATGGCGTGCCTATGGAAGCAACACTTATCATATTGGAGAAGTCCTGAGTACAATTTAATAAGATTTGTGTTCATGATTGTTGCGGCAATAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAGGAAATAAACACTCAGCAGGATTTGTTCAATGTGTTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATTACTGTTCAACAATTCTACCGTATGTGGCAACCGAGCGCTCCGTCTTGTATCGAGAAAAATTTGCAGGAATGTATTCTTCCATGGCTTATTCATTTGCACAGGTGGCTATTGAAATACCATATATCTTAGTGCAAGCAATTTTATATGTGGCTATCACATATCCAATGATTGGTTTCCACTGGTCAGTTCAGAAGGTCTTTTGGTACTTCTACACCACATTCTGCACATTTTTATACTTTGTGTATCTTGGAATGCTGATAATGTCATTAAGCTTAAATCTGGATCTAGCTTCTGTATTGTCAACTGCGGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCTAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGATTTGCCCTACAGCTTGGTCTTTGAAGGGTCTCCTAACTTCACAATATGGAGACATGGAGAAGGAAATACTCATATTCGGAGACAAAAAATCAGTCGGTTCCTTTCTAGAGGATTACTATGGGTTCAGGCATGACAGATTAAGTGTTGTGGCTGTGGTGCTTATTGCTTATCCAATTATTTATGCATCTCTCTTTGCCTATTGCATAGGGAAAATAAATTACCAAAAAAGATAG 4326 0.3939 MELTPRGRNNLTPRGRNQGHVVTFERDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDEITQEENGSRWQRSSSKRVVDVTKLGAVDKRLFIDKLIKHIENDNLNLLQKLRERMERVDVKLPSVEVRYKNLNVEAECEVVQGKPLPTLWNSFSSLFSGLVKTIYCNSQDTKMSILKDVSGIIKPSRLTLLLGPPSCGKTTLLMALAGKLEQSLTVSGEISFNGHRLDEFVPQKTSAYISQYDLHIPEMTVRETIDFSARCQGVGSRADIMTEITRKEKEQGIFPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDICADTLVGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPCNQAIQFFRDCGFWCPERKGVADFLQEVTSKKDQRQYWYRTDIPYSYVSVDDFSEIFKTSYWGRMLDDELSNPYDKSQSHKSSLSYSKYSLGKLDLFKACMKREILLMKRNSFIYIFKTVQLTITAIITMTVFLRTQLDVDLLGSNYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPAAILKIPFSVLDSLVWTSITYYVIGYSPEITRFLRQFLLLIFLHMSSTSMCRSLAAVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPKWLRWGFWLSPMSYGEIGITLNEFLAPRWQKIQDGNITVGREILKSRGLDFDSNFFWISIGALLGFTVVFDILFVVALTYLKEPKQSRALVSKKRLPQLKAGEKNNEVELKNKSVAVDISHTSKETQNTGKMVLPFLPLSIAFNDVQYFVDTPPEMKKHGSNEKNLQLLCDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVRYSAWLRLPREIDSATKGKFVEEVLETIELDDIKDSLVGITGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGKIIYNGLLGHHSNKLIEYFQSIPGVPKIKDNYNPATWMMEATSAAVEDELKIDFANIYKESPLHRETLEMVRVLSEPEQGSKDLHFSTRFPQNYLGQFMACLWKQHLSYWRSPEYNLIRFVFMIVAAIIFGAVFWQKGKEINTQQDLFNVFGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSFAQVAIEIPYILVQAILYVAITYPMIGFHWSVQKVFWYFYTTFCTFLYFVYLGMLIMSLSLNLDLASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLKGLLTSQYGDMEKEILIFGDKKSVGSFLEDYYGFRHDRLSVVAVVLIAYPIIYASLFAYCIGKINYQKR* 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3560 1441 Gene3D - 162 426 IPR027417 -
Tpr2g3560 1441 Gene3D - 856 1088 IPR027417 -
Tpr2g3560 1441 SMART AAA_5 186 419 IPR003593 -
Tpr2g3560 1441 SMART AAA_5 878 1070 IPR003593 -
Tpr2g3560 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 434 IPR027417 -
Tpr2g3560 1441 Pfam ABC-transporter N-terminal 96 152 IPR029481 -
Tpr2g3560 1441 Pfam ABC-2 type transporter 392 445 IPR043926 GO:0140359
Tpr2g3560 1441 Pfam ABC-2 type transporter 1050 1120 IPR043926 GO:0140359
Tpr2g3560 1441 Pfam Plant PDR ABC transporter associated 729 791 IPR013581 -
Tpr2g3560 1441 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1441 - -
Tpr2g3560 1441 Pfam ABC transporter 177 359 IPR003439 GO:0005524
Tpr2g3560 1441 Pfam ABC transporter 871 1021 IPR003439 GO:0005524
Tpr2g3560 1441 CDD ABCG_PDR_domain2 838 1076 IPR034003 -
Tpr2g3560 1441 Pfam ABC-2 type transporter 513 724 IPR013525 GO:0016020|GO:0140359
Tpr2g3560 1441 Pfam ABC-2 type transporter 1167 1379 IPR013525 GO:0016020|GO:0140359
Tpr2g3560 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 841 1093 IPR003439 GO:0005524
Tpr2g3560 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 865 1076 IPR027417 -
Tpr2g3560 1441 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 1441 - -
Tpr2g3560 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 156 434 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3560 Tpr-Chr2 38757538 38766403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3560 865 1053 Calmodulin-binding Proteins AT2G36910 28.431 7.18e-07 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3560 2 38757538 38766403 Tpr2g3560 2 38757538 38766403 ECH