Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3558 ATGGGTTGCTTTGGTTTCTGCAAAGAAAATGATTCTTACACAACTGCTGACAAAGGAATCTTCATGCAAAACAATCCTACAGGGAACTCAAGTTATCATGGAAGACACACACCAATAACCGTTCCTCGCCCTATAAATCTTCAACCTATTTCTGTCCCTTCTGTTACAGTAGATGAATTAAGGTCTTTGACAGATAATTTTGGTACAAAGACTTTCATCGGTGAGGGTGCATATGGAAAAGTATATCGCTCCATATTGAAAAATGGACGTGAAGTGGCAATTAAAAAGTTGGATTCCACTAAACAGCCAGACCAAGAATTTCTTTCTCAGGTCTCCATTGTATCAAGGCTAAAGCATGAAAATGTTGTTGAGCTTGTTACTTATTGTGTCGATGGTCCTTTGCGTGCCCTTGCGTATGAGTATGCTCCTAATGGATCCCTTCATGATATTCTACATGGACGCAAAGGCGTGAAGGGCGCAGAACCTGGTCAAGTTCTGACATGGGCTCAAAGAGTTAAAATTGCTGTTGGAGCAGCTAGAGGACTTGAATATCTTCATGAAAAGGCAGAGGTTCATATTGTCCATCGTTACATTAAATCTAGTAACATACTTCTATTCGAGGACGATGTTGCTAAGATTGCTGATTTTGATCTGTCGAATCAAGCCCCTGATGCTGCAGCACGTCTTCATTCTACCCGTGTTCTTGGAACTTTTGGTTATCATGCTCCAGAATATGCAATGACTGGAAACCTCAGTTCAAAGAGTGATGTTTACAGTTTTGGAGTTATACTGTTGGAACTCTTAACCGGGCGTAAACCTGTTGATCATACACTCCCCCGAGGACAACAAAGCCTTGTGACTTGGGCAACACCAAAACTTAGTGAAGATAAGGTGAAGCAGTGTGTTGATGTTAGACTAAAGGGAGAGTACCCTTCCAAGTCAGTTGCAAAGATGGCTGCTGTTGCTGCACTGTGTGTTCAATATGAAGCCGAGTTTCGACCAAATATGAGCATCATTGTCAAAGCTTTACAGCCTCTGATGAATAATAATACTCGTTCTGCTCAACCAAGGGAACCACGCAACTTGTAA 1089 0.4169 MGCFGFCKENDSYTTADKGIFMQNNPTGNSSYHGRHTPITVPRPINLQPISVPSVTVDELRSLTDNFGTKTFIGEGAYGKVYRSILKNGREVAIKKLDSTKQPDQEFLSQVSIVSRLKHENVVELVTYCVDGPLRALAYEYAPNGSLHDILHGRKGVKGAEPGQVLTWAQRVKIAVGAARGLEYLHEKAEVHIVHRYIKSSNILLFEDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGNLSSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKMAAVAALCVQYEAEFRPNMSIIVKALQPLMNNNTRSAQPREPRNL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3558 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 353 - -
Tpr2g3558 362 PIRSF ILK 9 358 - -
Tpr2g3558 362 SUPERFAMILY Protein kinase-like (PK-like) 46 343 IPR011009 -
Tpr2g3558 362 CDD STKc_IRAK 73 346 - -
Tpr2g3558 362 Gene3D Phosphorylase Kinase; domain 1 39 141 - -
Tpr2g3558 362 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Tpr2g3558 362 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3558 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 353 - -
Tpr2g3558 362 Gene3D Transferase(Phosphotransferase) domain 1 142 360 - -
Tpr2g3558 362 Pfam Protein tyrosine and serine/threonine kinase 71 343 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3558 Tpr-Chr2 38749341 38752330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3558 48 344 Receptor kinase-like Gene Family AT4G02010 49.502 5.78e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Tpr2g3558 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3558 K13436 - gmx:547595 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3558 2 38749341 38752330 Tpr2g3558 2 38749341 38752330 ECH