Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3557 ATGGCGTCTGATCTAAGCTCGAGGTTGTCAAAGAAAACATCTGTTTTGGGGTTGGAAGCATGGGAATTAATGGGGCTAATAGTTGGTTTATTCATTGTAATCATTCTTCTAGTGTTATCAATATGTCTTACTTCAAAAAAGAAATCCAGAAGAGTCAATGGCATGCTTCCACTGAGCCACAGGTTATCTGTTTCAGAAGAGATCAAAGAGATTAGCGTTGATCAGGTTTCAACAAATAGTCGTCCTCAGAATGGCGCATTTACGAGTCTTTATGACAAATTTAGTGACAAAGAATCCGAAAATATTTTGCTCCAAACGAAGAATGGTGAATATAACAGCCAATCAGGCTCGTTTATTCACGTCGAGAAAGACGCTGCTGGCTCTCAATCAGGTGAAGAAAATGGTGCTAAGTCTCTTTCTGCACACAGGCTTTCTTTGACTTCGCCGTCACCTCTGTCTGGTCTTCCCGAGTTCTCTCATCTTGGCTGGGGGCACTGGTTTACATTGAGGGACCTAGAACTAGCAACAAACAAGTTTTCAAAAGCGAATATTATTGGTGAAGGAGGATATGGAGTTGTTTATCAAGGCCAGCTGATCAATGGGAATCCAGTGGCTATTAAGAAGCTACTAAATAATCTTGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGTCATGTGAGGCACAAGAACTTGGTTAGACTTTTGGGTTTTTGCATTGAAGGCACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGAAATTTAGAGCAGTGGCTTCATGGAGCCATGCAGCAGCAATATGGTTTTCTCACGTGGGATGCTCGAATTAAAATTCTTCTTGGAACAGCTAAAGCGCTGGCTTATTTGCACGAAGCGATTGAGCCAAAAGTTGTCCATCGAGATATTAAGTCAAGTAATATTCTAATTGATGATGACTTCAATGCCAAAATATCCGACTTTGGACTAGCCAAGTTACTTGGTGCGGGAAAAAGTCACATTACGACTCGAGTAATGGGTACTTTTGGATATGTTGCTCCAGAATATGCCAATTCTGGCTTACTAAACGAGAAGAGTGATGTTTATAGCTATGGCGTATTGCTCCTTGAAGCCATTACTGGAAGAGACCCAGTGGATTATAACCGCTCAGCCGCTGAGGTAAATTTGGTCGATTGGCTGAAAATGATGGTAGGTAATAGGCACGCAGAAGAGGTGGTAGACCCAAACATGGAACCCAGACCATCAACAAGTGCACTTAAACGAGTCCTTTTGACTGCTTTGAGGTGTGTTGATCCAGATTCTGAAAAAAGACCCAAAATGAGTCAAGTGGTCCGCATGCTTGAATCAGAAGAATATCCCATACCTAGAGAGGATCGAAGACGCAGGAAGAGTAATGCCACAAATACTGATTTGGAGGCGCAGAAGGAGACTTCTGATACAGAGAAGAGTGATCACCCAGATTCCAAGTCCAGCGGAAAAAATGTAAGAAGAAATCAGCGAAAGTAA 1518 0.4196 MASDLSSRLSKKTSVLGLEAWELMGLIVGLFIVIILLVLSICLTSKKKSRRVNGMLPLSHRLSVSEEIKEISVDQVSTNSRPQNGAFTSLYDKFSDKESENILLQTKNGEYNSQSGSFIHVEKDAAGSQSGEENGAKSLSAHRLSLTSPSPLSGLPEFSHLGWGHWFTLRDLELATNKFSKANIIGEGGYGVVYQGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLVYEYVNNGNLEQWLHGAMQQQYGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSYGVLLLEAITGRDPVDYNRSAAEVNLVDWLKMMVGNRHAEEVVDPNMEPRPSTSALKRVLLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSNATNTDLEAQKETSDTEKSDHPDSKSSGKNVRRNQRK* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3557 505 Gene3D Phosphorylase Kinase; domain 1 160 254 - -
Tpr2g3557 505 MobiDBLite consensus disorder prediction 437 505 - -
Tpr2g3557 505 ProSitePatterns Protein kinases ATP-binding region signature. 185 208 IPR017441 GO:0005524
Tpr2g3557 505 Gene3D Transferase(Phosphotransferase) domain 1 255 469 - -
Tpr2g3557 505 SUPERFAMILY Protein kinase-like (PK-like) 163 460 IPR011009 -
Tpr2g3557 505 MobiDBLite consensus disorder prediction 437 498 - -
Tpr2g3557 505 Pfam Protein kinase domain 180 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3557 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Tpr2g3557 505 CDD STKc_IRAK 185 452 - -
Tpr2g3557 505 ProSiteProfiles Protein kinase domain profile. 179 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3557 505 PANTHER RECEPTOR-LIKE KINASE PLANT 2 505 - -
Tpr2g3557 505 SMART serkin_6 179 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3557 505 PANTHER OS01G0323000 PROTEIN 2 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3557 Tpr-Chr2 38744480 38748906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3557 17 454 Trihelix Transcription Factor Family AT1G70460 39.955 5.87e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tpr2g3557 Pkinase 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3557 - - gmx:100793499 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3557 2 38744480 38748906 Tpr2g3557 2 38744480 38748906 ECH
Tpr2g3557 2 38744480 38748906 Tpr5g0993 5 19741910 19746765 PCT