Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3536 ATGGAAGGCAAAGTTGCACTTCAAAAATTCCTACAAGTTCAGGAAAGGCTATATGATGAAAATACACATGCTTCCATTAAAAATACTGTAGGAATTGGATGTAGTGGTCTGAGTTTGAGTCTGAATAATAACTTAGAAGAGATCACTCCTCAGAATCAAGACCACCTTATCCCCGAACTCAAATTGGGGTGGCTGGAAAGTAAGGTAGAGGAGGTGAAGAAGGAAAATCAAATTTTAAGATGTATGTTAAATCAAGTAAGTCAACACTATGCACTTCTTCAAACTCAATTCTTAATAGCCATGCAGCAGCAACAACAACTGTCTACATCACCTAATGAAATCAATAAAGAAGAAGCAAAAATATTAAAAGAGGAGGATGGAGCAATAGCATCTGAATTAGCTTCTTGTAGAAAAAAAGCTAGAGTTTCCATTAGGGCACGTTCAGATTTCTCATTGATGAGTGATGGGTGTAGATGGAGAAAGTATGGACAAAAGATATCAAAGGTTAATCCCCACTGTCCACGGGCCTATTACCGTTGCAATATGGGATTGGGAACAACAACACCATGTCCCGTCCGTAAGCAGGTTCAAAGGTGTTGTGTAGATGAGACTGTATTCATCACAACCTATGAGGGGAATCACAATCATTCACTTCCACAAGCAGCAAAGTTAATGGCAAATACAACATCAGCAGCATTGAGCATGTTTCTTTCAGGTTCAACTTCAACCACTATGTCAAATTCAGGACTCTTCTCTTCCTCTGCCTCCACTAGCTTGACTACTTTATATTCATCTGCATCATCATGTCCTACTATAACATTGGACTTAACTCAACCCTCTACTAACTTCTTCAAATTCCAAACACCTATTTCTTCAAACTACCTCAATTACCAAACCTTGCATGGTTACACTCAACAATCTAATGAGGGATTGAGTTTGTCTTCTAAGATTTCAACCATGATACCCTCAGAGAAAAACCTTAGCTTGATTGATGGTGTGGTTGCAGCTATAGTCAAGGATCCTTCTATTAAGGCAGCATTAGATGCAGCTGTTTCTTCACTCCCTGGAGTTGTATTGCAACAGTGA 1086 0.3904 MEGKVALQKFLQVQERLYDENTHASIKNTVGIGCSGLSLSLNNNLEEITPQNQDHLIPELKLGWLESKVEEVKKENQILRCMLNQVSQHYALLQTQFLIAMQQQQQLSTSPNEINKEEAKILKEEDGAIASELASCRKKARVSIRARSDFSLMSDGCRWRKYGQKISKVNPHCPRAYYRCNMGLGTTTPCPVRKQVQRCCVDETVFITTYEGNHNHSLPQAAKLMANTTSAALSMFLSGSTSTTMSNSGLFSSSASTSLTTLYSSASSCPTITLDLTQPSTNFFKFQTPISSNYLNYQTLHGYTQQSNEGLSLSSKISTMIPSEKNLSLIDGVVAAIVKDPSIKAALDAAVSSLPGVVLQQ* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3536 361 Pfam WRKY DNA -binding domain 155 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3536 361 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 134 354 - -
Tpr2g3536 361 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 119 - -
Tpr2g3536 361 SUPERFAMILY WRKY DNA-binding domain 146 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g3536 361 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 119 IPR044810 GO:0003700
Tpr2g3536 361 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 134 354 IPR044810 GO:0003700
Tpr2g3536 361 ProSiteProfiles WRKY domain profile. 148 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3536 361 SMART WRKY_cls 153 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3536 361 Gene3D WRKY domain 138 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3536 Tpr-Chr2 38565783 38568885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3536 138 278 WRKY Transcription Factor Family AT4G04450 59.603 3.99e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g3536 WRKY 1.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3536 - - gmx:100779314 294.664