Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3531 ATGGAAACATTAGAACAAACTCAATCCTCTTCATCTTCATCTTCTTCAATAGATAGTAACAAATATAGCAACTGCTGCAGAAACAGAACTGATTTAAGCACTGATCTCAAACTTGGTCTTAGCATCTCTCCTTCTTCTCCATCTCAATTACCATTCAATTCAACAACACCAAGAGAGGAAACATTTGCTTGGCCACCAGTTAATAAGTCAGTATTGAGAAGAAACATCATTGTTGAGAAACAAAATCATATTCATCATCAAAGATCTTTATTTGTCAAAGTTTATATGGAAGGAATTCCAATTGGTCGAAAATTAAATCTGCTTGAACATCATAACTATGATGGACTTGTTCAAGCTCTTTGTCATATGTTTAAGACAATTATTCTCTCTCCTAATTCTCAACCACTTAATTCTTGGAATTTTCATGTTCTAACTTATGAGGATCAAGAAGGAGATTGGATGATGGTTGGAGATGTTCCTTGGGAGATGTTTTTGTCAAGTGTGAAGAGGCTGAAGATCACAAGAGCTAACAGCTGCTAA 540 0.35 METLEQTQSSSSSSSSIDSNKYSNCCRNRTDLSTDLKLGLSISPSSPSQLPFNSTTPREETFAWPPVNKSVLRRNIIVEKQNHIHHQRSLFVKVYMEGIPIGRKLNLLEHHNYDGLVQALCHMFKTIILSPNSQPLNSWNFHVLTYEDQEGDWMMVGDVPWEMFLSSVKRLKITRANSC* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3531 179 SUPERFAMILY CAD & PB1 domains 83 173 - -
Tpr2g3531 179 Gene3D - 83 179 - -
Tpr2g3531 179 PANTHER AUXIN-RESPONSIVE PROTEIN IAA31 11 179 - -
Tpr2g3531 179 MobiDBLite consensus disorder prediction 1 21 - -
Tpr2g3531 179 Pfam AUX/IAA family 53 176 IPR033389 -
Tpr2g3531 179 ProSiteProfiles PB1 domain profile. 89 178 IPR000270 GO:0005515
Tpr2g3531 179 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 179 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3531 Tpr-Chr2 38528764 38530180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3531 92 173 B3 DNA Binding Superfamily AT2G46530 35.366 1.47e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Tpr2g3531 AUX_IAA 1.2e-32 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3531 K14484 - gmx:100818083 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3531 2 38528764 38530180 Tpr2g3531 2 38528764 38530180 ECH