Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3530 ATGAGCCAAACAAACAAGAGCTTTTGGGACATGAAGCTACTATGTTTGTTTGGGATCATAGGCTTTGTGATTGTGAAAGGGATAGAAGGTTTAGAGAATGGTAATGTGACAGACATGCAATATGTCAGAGGAAGAGGTTTCAACTATAGACCTTTGATGGTTGGTCTTACTCTTATCAATGGAGCTGCTGCTAAAGGAGCTGTCTGTCTGGATGGATCTTTACCGGCTTACCACTTCCACCGCGGATACGGTTCAGGATCAAACAGTTGGCTAGTACATTTGGAGGGAGGAGGCTGGTGTGGAACTGTCAGAAATTGCATTTATAGTAAGAAAACGCGTCACGGTTCATCGTATTTTATGGAAAAACAAATACCATTTATTGGAATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAAATTCGTTATTGTGATGGCGCATCATTTAGCGGAGACAGTCAAAATCAGAAAGCAGGGTTGTATTTCAGAGGGCAACGCATATGGCAAGCTGCTATGGAAGATTTAATGTCGAAAGGGATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCAGCAGGGGGATTATCAGCTATACTACATTGCGATGAATTTCGGCAATTGTTTCCTGGAACAACTAGAGTAAAGTGCTTTAGTGATGCTGGATTATTCCTTGACTCTATTGATGTATCTGGCCGTCGTAGTTTAAGGAATTTTTTTGGAAGTGTAGTCACCTTACAGGGTGTGCAGAAGAGCCTTCCAAGGAGTTGTACCAATCACCTCAATCCAATTTTGTGCTTTTTCCCTCAGCGTTTAATTGCCAATATTAGGACACCGCTATTTCTTCTAAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTAGCGCCACCATCTGCTGACTATCGTTGGAATTGGTATGAATGCAGAAAAAATTATGCACGTTGCAGTTCACCACAGATACAATATCTGCAAGGTTTTCGAAATCGGATGCTTAGAGTTACAAGACGCTTCTCAAAGTCGCGCCAAAATGGATTATTCATTAATTCATGTTTCGCTCACTGTCAATCTGAAAGACAGGATACGTGGTTTGGCCGTGGTTCTCCTCATATTGGAAATAAAGGTATTGCAGATTCTGTTGGGAACTGGTTTTTTGACCGACTTGGTGTCCAAGCTATTGGGTGTGCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAACTAA 1254 0.4139 MSQTNKSFWDMKLLCLFGIIGFVIVKGIEGLENGNVTDMQYVRGRGFNYRPLMVGLTLINGAAAKGAVCLDGSLPAYHFHRGYGSGSNSWLVHLEGGGWCGTVRNCIYSKKTRHGSSYFMEKQIPFIGILSNKAEENPDFFNWNRVKIRYCDGASFSGDSQNQKAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLSAILHCDEFRQLFPGTTRVKCFSDAGLFLDSIDVSGRRSLRNFFGSVVTLQGVQKSLPRSCTNHLNPILCFFPQRLIANIRTPLFLLNAAYDTWQIQASLAPPSADYRWNWYECRKNYARCSSPQIQYLQGFRNRMLRVTRRFSKSRQNGLFINSCFAHCQSERQDTWFGRGSPHIGNKGIADSVGNWFFDRLGVQAIGCAYPCDKTCHNLVFN* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3530 417 Pfam Pectinacetylesterase 51 395 IPR004963 GO:0016787
Tpr2g3530 417 PANTHER NOTUM-RELATED 17 416 IPR004963 GO:0016787
Tpr2g3530 417 PANTHER PECTIN ACETYLESTERASE 17 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3530 Tpr-Chr2 38515480 38521014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3530 53 416 Carbohydrate Esterase AT1G57590 69.231 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3530 K19882 - gmx:100791571 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3530 2 38515480 38521014 Tpr2g3530 2 38515480 38521014 ECH
Tpr2g3530 2 38515480 38521014 Tpr1g2345 1 26299365 26303622 ECH
Tpr2g3530 2 38515480 38521014 Tpr6g0376 6 3057022 3060434 ECH