Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3522 ATGGGAGCGCAATATTTATCTAAGGTGAAAAATGTGTCGATCATATTTCTTGTAATTGGGTTATGCTTATGCACCCTTGTTGAATGCAAAAAACATGTAAGCATAAAAAACAGACTAGGATCTGGGAAAAATTTGAGCATACATTGTAAATCCGGAGATGATGATCTTGGAGCGCAAAACATAGCCGATGGACAAGAATATGGGTTTAGCTTCGATGTTAATTTGTTTAGAACAACATTATTTTTCTGTAATTTAGGATGGGAAAAAGTTCCACAGTATTATATTGAGGCATATTCATATGCCAAGGACCATGTACGGTGTGACAGTGAATGTTCATGGATAGTAGCTGCTGAAGTATATGACAACGACATCATTCACTTGAGAACATGTAATTTTGCTGTTTCGGTTAGAAAAAGTGCATGCCTATGGACCACACTAAGGGCAGCACAGCAAACCATGATTGCTTCTCTTGTTGCCAAGGGCAAATGA 489 0.3783 MGAQYLSKVKNVSIIFLVIGLCLCTLVECKKHVSIKNRLGSGKNLSIHCKSGDDDLGAQNIADGQEYGFSFDVNLFRTTLFFCNLGWEKVPQYYIEAYSYAKDHVRCDSECSWIVAAEVYDNDIIHLRTCNFAVSVRKSACLWTTLRAAQQTMIASLVAKGK* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3522 162 Pfam Plant self-incompatibility protein S1 32 117 IPR010264 -
Tpr2g3522 162 PANTHER - 22 117 IPR010264 -
Tpr2g3522 162 PANTHER PUMILIO HOMOLOG 15-LIKE 22 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3522 Tpr-Chr2 38477233 38479773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3522 33 118 Carbohydrate Esterase AT3G16970 33.708 4.19e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3522 - - mtr:MTR_4g123577 187.193