Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3515 ATGGGTTTCTACACTCAACAATCCATCTCTAATCTAACCATAAGCCAAGCCATATATGAAGCAGCTCTAATCATAGCAGTTCTCAGATGGATCTTCTGCTTAGTTTTCAGAATAATCAACAACAGAAAAACAGAACAAGAACAACAACAAAAACAACACTCTTCTTGTTGTCAAATGTTACCTTTGACAAGTTTTGGTGAAATTAAGGAAAGACATCCAGAAACATCAGAAGATTCAACATGTGCTGTTTGTTTGAATAAACTGAAAATGGAAGATGAAGTTAGAGAATTGATGAACTGTGATCATGTTTTTCATAGAGAATGCATTGATAAATGGTTAGAACATGGTTATGAAAATGAAAATCATAATCAAACTTGTCCACTTTGTAGAGCTCCTTTGATTAATAGTTTTTCAGTTTCTTCTGAGATTTCAAGCTGTGCTGGATTTTCACCTCCTCAACCTAGTTGGGCTGTTGAAAGACTTCTTTATCTCTTTGGAGATGATCTTTTACCTTGTTAA 519 0.341 MGFYTQQSISNLTISQAIYEAALIIAVLRWIFCLVFRIINNRKTEQEQQQKQHSSCCQMLPLTSFGEIKERHPETSEDSTCAVCLNKLKMEDEVRELMNCDHVFHRECIDKWLEHGYENENHNQTCPLCRAPLINSFSVSSEISSCAGFSPPQPSWAVERLLYLFGDDLLPC* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3515 172 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 171 - -
Tpr2g3515 172 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 171 - -
Tpr2g3515 172 SMART ring_2 81 129 IPR001841 -
Tpr2g3515 172 Coils Coil 172 172 - -
Tpr2g3515 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 144 IPR013083 -
Tpr2g3515 172 Pfam Ring finger domain 80 130 IPR001841 -
Tpr2g3515 172 ProSiteProfiles Zinc finger RING-type profile. 81 130 IPR001841 -
Tpr2g3515 172 SUPERFAMILY RING/U-box 73 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3515 Tpr-Chr2 38434310 38435152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3515 1 171 C3H Transcription Factor Family AT3G43430 44.134 4.99e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3515 K16281 - gmx:100306203 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3515 2 38434310 38435152 Tpr2g3515 2 38434310 38435152 ECH