Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3510 ATGGCTTTCTTCATCTTAATCTTCTTCATGTTGCTTGTCTCAGTCTCACCCTCACCCTCAAGTTCTGCTTCATCATGGCTAACAGTTTCTCCTAAGAAATTCGTTGAATCTGCCAATGAAGTTAGAACATTTTTAGAACAAATGCATTCCACTTTATCAACCTTCAACAACAACACCTCTGGATTACCAAATGGCATTCAGGATTGCCTTGATTTACTTGACATGTCCTCCGAACAGCTTAGGATGTCTATGTCTGCCATGCAAAATCCCAAAGGGAAAGATCATAAACTTGGAACTGGAAATCTGAGCTCTGATCTAAGAACATGGCTGAGTGCTGTTCTTACAAACTCAGACACATGTATTGAAGGATTAGAACAAGGTACAGCTGTTAAGGGACTTGCATCAAAGGACCTTAATCGTGTAATGTCTATGGTTAAGACTCTGTTAGCTCAAGTGATTCCTGTCCATGTTGATCAAGTCAAGAAGGATCAGTTTCCATCCTGGATTAGTGAGGAGGACAAGATGCTATTGAGGGAGAATTTTAGAGTGAGGACTCCTGATGCTGTTGTGGCCACTGATGGAACTGGAGATTACAGTAAAGTGACGGACGCGATACGAGCGGCACCTGATTATAGCATGAAAAGATTTGTTATATATGTGAGGAGAGGTATTTATCTTGATGAATATGTTAGGATTAATGCAACCAAATGGAATATTATGCTCTTAGGTGATGGCATTGGTGCTACTGTTATCTCCGGTAGCCGGAATTATGCCGACGGTTATAAAACGTTCAACACTGCTACTTTTGCTGTTGATGCTGTAGGGTTTATAGCATGCAACATTTCGTTTGAAAACACAGCAGGACCTGAGAAGGACATGGCAGTAGCATTAAGGTCTGATTCGGATCTCTCTATATTTTATCGGTGTGGGATATACGGTTATCAAGATAGCCTATATCCCCACTCTAAGCGTCAATTCTACAAGGAGTGCATAATAGCGGGTACAGTCGATTTCATATTTGGAGATGCAACGGCTGTGTTTCAGAGCTGTCAGATTTTAGCCAAACAAGGGACACTTCGACAAAAAAACACTATCACCGCTCAAGGAAGAATAGACCCAGGCGAATCAACTGGTTTCTCGTTCCAGTTCTGTAATATTTCAGCTGACTATGACCTTAAAGCTACCACTGAAACATATCTCGGTAGACCTTGGAGGAATTTTTCACGAACGATTTTTATGGAATCCCACCTAAGTAACGTGATAGATCCCAAAGGGTGGTTAGAGATGGATGGAACTCACTATTCGGATACATCGACTTATTGTGAGTACAGTAATTTTGGAGCAGGTGCTAAGCTAGATAATCGGGTAAAATGGCCTGGGTATTATATATTGGATGAGAGGGAAGCTCAAGAGTTCAGCGTGGATAAATTCATTGAAGGGAATCTTTGGTTACCTTCCAGTGGTATTAACTACACGGGTGGTTTATAA 1488 0.4126 MAFFILIFFMLLVSVSPSPSSSASSWLTVSPKKFVESANEVRTFLEQMHSTLSTFNNNTSGLPNGIQDCLDLLDMSSEQLRMSMSAMQNPKGKDHKLGTGNLSSDLRTWLSAVLTNSDTCIEGLEQGTAVKGLASKDLNRVMSMVKTLLAQVIPVHVDQVKKDQFPSWISEEDKMLLRENFRVRTPDAVVATDGTGDYSKVTDAIRAAPDYSMKRFVIYVRRGIYLDEYVRINATKWNIMLLGDGIGATVISGSRNYADGYKTFNTATFAVDAVGFIACNISFENTAGPEKDMAVALRSDSDLSIFYRCGIYGYQDSLYPHSKRQFYKECIIAGTVDFIFGDATAVFQSCQILAKQGTLRQKNTITAQGRIDPGESTGFSFQFCNISADYDLKATTETYLGRPWRNFSRTIFMESHLSNVIDPKGWLEMDGTHYSDTSTYCEYSNFGAGAKLDNRVKWPGYYILDEREAQEFSVDKFIEGNLWLPSSGINYTGGL* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3510 495 CDD PMEI-like_4 3 155 - -
Tpr2g3510 495 Pfam Pectinesterase 187 481 IPR000070 GO:0030599|GO:0042545
Tpr2g3510 495 ProSitePatterns Pectinesterase signature 2. 332 341 IPR033131 -
Tpr2g3510 495 PANTHER PECTINESTERASE 30 154 - -
Tpr2g3510 495 PANTHER PECTINESTERASE 160 494 - -
Tpr2g3510 495 SMART PMEI_2 16 148 IPR006501 GO:0004857
Tpr2g3510 495 SUPERFAMILY Pectin lyase-like 185 494 IPR011050 -
Tpr2g3510 495 Pfam Plant invertase/pectin methylesterase inhibitor 15 144 IPR006501 GO:0004857
Tpr2g3510 495 Gene3D - 182 495 IPR012334 -
Tpr2g3510 495 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 30 154 - -
Tpr2g3510 495 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 160 494 - -
Tpr2g3510 495 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 149 IPR035513 -
Tpr2g3510 495 Gene3D Invertase/pectin methylesterase inhibitor family protein 9 153 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3510 Tpr-Chr2 38385649 38387665 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3510 1 495 Carbohydrate Esterase AT3G43270 50.191 1.81e-177 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3510 K01051 - gmx:100814987 533.102