Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3508 ATGGCTAATTTATCTTTTAAACTCTTCTTTCTTCTCTTAACAATTTTCCACTCACACACTTTAACTTTCAACAATTCCTCAAATTCTTCCACAAAAACATTACATGCAAAGATCTATTCATTAAAATCCTTCTGCAAAACTACTCCATATCCTGAAGTTTGTTTCAATTCATCAAAACTATCAATCTCAATAAACATAAATCCAAACATCATTAGCATCCTTCTTAACACACTTCAAGTAGCAATATCTGAAACAACAAAACTATCTAATCAATTCAACAATGCTAAACAACATTCAAACATCATAGAGAACAAAAGAGGTGTGTTACAAGATTGCAATGAACTTCAACAATCTACTTTGACTTCCTTAAAAAGATCATTATCTGGAATCAGTTCCTCAAACTCTAGAAAGTTAGTTGATGCAAGAACTTATCTCAGTGCAGCACTTACTGATAAGAACACATGTTTAGAAAGCTTAGATTCGGCTTCGGGTACAATGAAGCAAGTTCTAGTGGATTCAGTGATAGACACTTATAAGCATGTTAGTAATTCTCTGTCAATGCTCCCTGAGCCTGAGGAAAGAGCTTTGAAAGGACGTGGTAACAGACGTTTAATGGATTCTCTAACGTGGTTATCAAGCAAAGATCACCGCCGGTTCTTGCAAAGTACAAATGATGTAGTTGTGGCTGCAGATGGAAGTGGAAACTTTAGCACCATCAATGAAGCCATTAACTTTGCTCCAAATAACAACTATGATAGGATAATAATCTATGTGAAACAAGGAGTGTATGAGGAAAATGTTGAAATCTCAAGTGATAAAACCAATATTGTTTTACTTGGTGATGGAAGTGATGTCACTCTCATTACTGGCAATAGAAGTGTTGTTGATGGCTGGACCACTTTCAGATCTGCAACTTTAGCGGTCTCCGGTGAAGGTTTTCTGGCACGCGATATAGCTTTTGAGAACAAGGCAGGACCAGAGAAGCATCAAGCAGTTGCTTTAAGAGTGAATGCAGATTTAACAGCTTTTTACAAATGTGCAATGTATGGTTACCAAGACACACTTTATGTTCATTCCTTTAGACAATTCTATAGAGAATGTGACATTTTTGGGACCATAGATTTCATATTTGGTAATGCAGCAGTAGTTTTACAAGCATGTAACATTGTTTCAAGAATGCCATTACCTAATCAATTCACTGTCATCACTGCACAAGCCAGAGATTCTCCTGATCAAGACACTGGCATCTCAATCCAAAATTGTTCAATTTTAGCTACTACTGATTTGTATGACAACTCTAACAACATTAAAAGTTACCTTGGAAGACCTTGGAGGGTTTATTCTAGGACTGTTTACATTGAGTCTTACATTGATGTGTTTATTAATCCAATGGGATGGACAAAGTGGTCTCATGATGGTGATAAAGGGTTGGATACTTTGTATTATGGTGAGTATGCAAATTATGGACCTGGTTCTGGAACAGATAAAAGAGTGAAATGGTTAGGGTACCATTTGATGGATTTTGATAGTGCAAATAACTTCACTGTTTCTGAGTTCATTATTGGTGATGCTTGGATTGGATCTACTTCTATCCCTTATGATGATTGGATTTGA 1614 0.3606 MANLSFKLFFLLLTIFHSHTLTFNNSSNSSTKTLHAKIYSLKSFCKTTPYPEVCFNSSKLSISININPNIISILLNTLQVAISETTKLSNQFNNAKQHSNIIENKRGVLQDCNELQQSTLTSLKRSLSGISSSNSRKLVDARTYLSAALTDKNTCLESLDSASGTMKQVLVDSVIDTYKHVSNSLSMLPEPEERALKGRGNRRLMDSLTWLSSKDHRRFLQSTNDVVVAADGSGNFSTINEAINFAPNNNYDRIIIYVKQGVYEENVEISSDKTNIVLLGDGSDVTLITGNRSVVDGWTTFRSATLAVSGEGFLARDIAFENKAGPEKHQAVALRVNADLTAFYKCAMYGYQDTLYVHSFRQFYRECDIFGTIDFIFGNAAVVLQACNIVSRMPLPNQFTVITAQARDSPDQDTGISIQNCSILATTDLYDNSNNIKSYLGRPWRVYSRTVYIESYIDVFINPMGWTKWSHDGDKGLDTLYYGEYANYGPGSGTDKRVKWLGYHLMDFDSANNFTVSEFIIGDAWIGSTSIPYDDWI* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3508 537 Pfam Pectinesterase 225 523 IPR000070 GO:0030599|GO:0042545
Tpr2g3508 537 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 190 IPR035513 -
Tpr2g3508 537 Pfam Plant invertase/pectin methylesterase inhibitor 41 187 IPR006501 GO:0004857
Tpr2g3508 537 CDD PMEI-like_3 43 187 - -
Tpr2g3508 537 PANTHER PECTINESTERASE 7 535 - -
Tpr2g3508 537 ProSitePatterns Pectinesterase signature 2. 369 378 IPR033131 -
Tpr2g3508 537 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 188 IPR035513 -
Tpr2g3508 537 Gene3D - 220 536 IPR012334 -
Tpr2g3508 537 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 186 IPR006501 GO:0004857
Tpr2g3508 537 PANTHER PECTINESTERASE 7 535 - -
Tpr2g3508 537 SUPERFAMILY Pectin lyase-like 220 534 IPR011050 -
Tpr2g3508 537 SMART PMEI_2 36 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3508 Tpr-Chr2 38360354 38362899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3508 27 537 Carbohydrate Esterase AT2G26440 62.879 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3508 - - gmx:100776969 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3508 2 38360354 38362899 Tpr2g3508 2 38360354 38362899 ECH