Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3507 ATGGCATTTCAAGATTTCGACCTCATCACAGAACGACGAAAAAGTGAGAAGAGACAACAACTGAAGAAAAGAATCCTCATCGGTGTTGTTTCTACCGTTGTTCTCGCGGGTCTTATAGGTTGTGCGTTCTTCGTTGTCACCTCAAAAGGCGTTTTTGGTGGCAATACAAAGGAAGAATCTTCTCAAACTTCTAAGGGTAACAAACAACAACATATTGCACATTCAGAAAGGATAGTGAAATTGGTATGCACTTCTGCAGATTACAAAGAAAAATGTGAAGGACCTCTTAACAAAGCAATAGAAGCTGATCCTAAACTTCAACACCCTAAAGATCTTCTCAAAGTATATGTTAAAGTTGTCGAAGATGAGGTTACCAAAGCTTTCGACAAAACAAACACATTCAAATTTGAAACTGAACAAGAGAAAGGTGCATTTGAGGATTGTAAAAAGCTATTTGGAGATGCTAAGGATGATTTACAAACCTCTATTGATCAACTCACTGCAATTGAATTCAAGAAACTTTCTTCAAAAGCACCTGACTTGAACAGTTGGTTGAGTGCTGTTATCTCTTTTCAACAGACTTGTATTGATGGTTTTCCTGAAGGGAAAACGAAGACTAGTCTTCAGAAACTTTTTGTGGATTCTAAGGAATTTGTTAGCAATTCACTTGCTATGGTCACTCAGGTTTCTACATTCCTTTCTACGGTTCAGACCCTTGCACGCGGCCGTTTGTTGTTGTCCGATAACTCCCCTGCCGCCTCTTTGGATTCTGAAGGTATTCCTGAATGGATCCATGCCGAGGAAAGAAGGGTTTTGAAGGCTGCTGATATTAGACCTACACCTAATGTCACTGTTGCAAAAGATGGCGGTGACTTCAAAACCATCTCCGAAGCTTTAGCTGCCATTCCTGCAACCTATACTGGAAGGTATGTGATTTTTGTTAAAGAAGGAGTGTACGACGAGCAAGTGACAATAACAAAGAAAATGCAAAATGTAACCATGTATGGTGAGGGATCACAAAAGAGTATCATCACTGGTAGCAAAAACTTTAGGGATGGAGTGAGGACCTTCCAAACTGCAAGTTTTGTGGTAGAAGGAGAAGGATTTTTAGGACTAGCAATGGGATTCAGAAACACAGCTGGTCCTGATGGACATCAAGCAGTGGCAGCAAGAATCCAAGCAGATCGCGCTGTATTTGCCAACTGTCGTTTCGAAGGATACCAAGACACATTATACACACAAGCACACAGACAATTTTACCGTAGTTGTATCATAACAGGAACAATCGATTTCATCTTCGGAGACGCAGCAGTTGTATTGCAAAATTGTATCATGATTGTTAGAAAACCAATGGACAATCAAGGTAACATGGTAACAGCACAAGGTAGAATGGACAAACAACAAGCAACAGGAACAGTTCTACAAAAATGTCAAATTAAAGCTGATGACACATTGTTAGCTGTTAAAGATAAAATAAAAAGTTACCTTGGTAGACCATGGAAGGAATTTTCAAGAACAATTGTTATGGAAACTGAAATAGGTGAATTTATTCATCCAGATGGATGGACACCTTGGGAAGGAAACTTTGCATTGAATACATTGTATTATGCTGAGTATAATAACACAGGACCTGGTGCTAGTACTAGTGCTAGGGTTAAGTGGCCTGGTTACAAAGTTATTAACAAAGAAGAAGCTAGTAAGTACACTGTAGCAAATTTCTTGAAAGGTACATGGGTTCAAAGCTCAGGTGTACCTTCACAGCAAGGATTGTACAATTAA 1779 0.3935 MAFQDFDLITERRKSEKRQQLKKRILIGVVSTVVLAGLIGCAFFVVTSKGVFGGNTKEESSQTSKGNKQQHIAHSERIVKLVCTSADYKEKCEGPLNKAIEADPKLQHPKDLLKVYVKVVEDEVTKAFDKTNTFKFETEQEKGAFEDCKKLFGDAKDDLQTSIDQLTAIEFKKLSSKAPDLNSWLSAVISFQQTCIDGFPEGKTKTSLQKLFVDSKEFVSNSLAMVTQVSTFLSTVQTLARGRLLLSDNSPAASLDSEGIPEWIHAEERRVLKAADIRPTPNVTVAKDGGDFKTISEALAAIPATYTGRYVIFVKEGVYDEQVTITKKMQNVTMYGEGSQKSIITGSKNFRDGVRTFQTASFVVEGEGFLGLAMGFRNTAGPDGHQAVAARIQADRAVFANCRFEGYQDTLYTQAHRQFYRSCIITGTIDFIFGDAAVVLQNCIMIVRKPMDNQGNMVTAQGRMDKQQATGTVLQKCQIKADDTLLAVKDKIKSYLGRPWKEFSRTIVMETEIGEFIHPDGWTPWEGNFALNTLYYAEYNNTGPGASTSARVKWPGYKVINKEEASKYTVANFLKGTWVQSSGVPSQQGLYN* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3507 592 CDD PMEI-like_3 81 231 - -
Tpr2g3507 592 Pfam Pectinesterase 282 576 IPR000070 GO:0030599|GO:0042545
Tpr2g3507 592 ProSitePatterns Pectinesterase signature 2. 425 434 IPR033131 -
Tpr2g3507 592 PANTHER PECTINESTERASE 14 590 - -
Tpr2g3507 592 SMART PMEI_2 74 225 IPR006501 GO:0004857
Tpr2g3507 592 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 230 IPR035513 -
Tpr2g3507 592 SUPERFAMILY Pectin lyase-like 279 587 IPR011050 -
Tpr2g3507 592 Pfam Plant invertase/pectin methylesterase inhibitor 79 225 IPR006501 GO:0004857
Tpr2g3507 592 PANTHER PECTINESTERASE 14 590 - -
Tpr2g3507 592 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 229 IPR035513 -
Tpr2g3507 592 TIGRFAM PME_inhib: pectinesterase inhibitor domain 74 229 IPR006501 GO:0004857
Tpr2g3507 592 Gene3D - 277 590 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3507 Tpr-Chr2 38357128 38359764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3507 1 592 Carbohydrate Esterase AT2G26450 46.240 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3507 - - gmx:100784679 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3507 2 38357128 38359764 Tpr2g3507 2 38357128 38359764 ECH