Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3502 ATGGCTTCTTCAGACAATTTTCAATCTTCTCACTCTCCTCACTCTTCTTCTCTCTCTGGCGAAACAATTCCTCCTCCTAATCTCTGTATGCAGAAATTTCGGCTTTATGAGACTCTATCGAACTTTTACATGATAGGAAGAGACAAGAGCAGGACATACTGGAGGGTACTAAAGATTGACCGTCTAGATCCTTCTGAGCTAAATGTGCTTGAAGATTCTGCCACATATACAGAAAGGGAATGTTCTGATCTTTTACGGCGGATAAATGAAGGGAACAAGTCCACTGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTACTTATCACGAAAAGGAGGAAAATTGGTTCAATCTGTGGTCATATAGTTTATGCTATCTCAAAGACTGAGATGATTCCATTGCCGAATTCTTCAGTTCGTTCTAATATCATTAATTCAAAAAATGAAAACAGGTATAAGAAGCTTCTATGCACAGTTGACCTTACGAAGGACTTCTTTTTCAGCTACTCATACCACATCATGCGCAGTCTTCAAAGGAACATGTGCGACCCTGAGACAGGCCATGTCCTTTACGAGACCATGTTTGTCTGGAATGAATACTTAACCCGAGGAATTAGGAATCAACTCCAGAATACTTTTTGGACAGTTGCACTAGTTTATGGCTTCTTTAAACAGGACACACTTGAGATATCTGGACGGGAGTTCATACTGACACTCATTGCGAGAAGATCACGCCATTATGCTGGCACTAGGTATTTAAGGCGAGGTGTTAACGATAAGGGCAGAGTAGCAAATGATGTTGAGACAGAACAAATAATCTTTGAGGATGTTCCAGAAGGTCTTCCCATCCCGATTAGCTCTGTCATCCAGAATCGTGGCTCGATCCCTCTTTTCTGGTCACAGGAAACTTCACGTCTAAATATTAAACCAGATATTATAGTGTCAAAGAAGGACCAGAATTATCAAGCTACTAGACTCCACTTTGAAAATCTTGTCAAAAGATACGGAAATCCCATTATAATTTTAAATTTAATAAAGACCCAGGAGAAGAAGCCTCGTGAGGCCATTCTTCGTCAAGAGTTTGCTAATGCCATAGAGTTCATCAACAAAGATTTATCTGAGGACAACAGGCTTAGGTTCCTTCATTGGGATCTACACAAACATTTTCACAGCAAAGCTACAAATGTATTGCTGCTTCTAGGCAAAGTGGCTGCATATGCATTGGCGTTAACAGGTTTTTTCTATTGCCAAGCGTCATCGACCTTGAGACCTGAAGACTGTCTAAAATGGCCGCCTACAGATGATTCTGTTAAGGGAAGCTTTTCAGCTACTGTACACGCTGAATATGATAACGAGGATGCTAATGATTTAGAGAGGAAACCAAGCGATGGAATTAATATTTCCGATGAAAATCATTCTGCCAAATCACCCAGGTTGCAAAAGGGGGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGCACAAATGTTGCACAATTTGCGTATGGGTTGGCTGCTATTGGCCACCAGCTTCACTCTCTGGGAATTATTCAGCACCCAAGTATTGATCTTGATGATCCTGTAGCTAATGATTTGATGCAGTTTTATGAGCGGATGGGTGACACACTTGCACATCAATATGGTGGTTCTGCTGCACACAACAAGATATTCTCTGCGAGGAGGGGCCAATGGAAAGCTGCAACACAGTCTCAGGAGTTTTTTAGAACTCTGCAACGCTATTACAGCAATGCTTGGATGGATGCTGAGAAACAAGATGCAATCAATGTATTCCTGGGGCATTTTCAACCACAACAGGGTATGCCTGCTCTATGGGAGTTGCGTTCAGATCAGCACTACGGTACAGGGAGGCTCGGTGACGATGATACAAGGTCATTTATCAAAAGATCTTTCTCAGATGGAAACATTCTTCGTGACAGTTCTACACCCATGTCAGCTCCAAATGCCAAGAACGAAAAATTCTCTAACCCAGGTTTACCAGACCGATCAGGAGAAGGGAGCAAGGCCTTTTGTGAGTCATCACCCGAAATATCTACTACTGAGACTGAGAGTGACATTTCATTATCAAGGTACACTCCCACAATGCCTCGGAAACAGCTTTTTGTAGACATGCAGAGAGAACGCTGTGCTGAGAGTCATCATATTTACTATTCTGAGCAAGGTGATTCCTTCAGCTGCTCCAACTTTGTGGACCTGGATTGGCTATCTTCTTCAGCAAATTCATGTGAAGAAGAGCCATACGAGAGGTCATCAATTACCAACTCCCCAATTGACGGGCTTTCTTCAGAAAATGTTGTCAATGGAGTTATAGTCGGAGAAACAACTGCCTCCGCTAGTGATTGGGCCAGCACCAGCATAAAGGAGAGGGATTCAACTGAACCAGAGATATCCTATGGTGATGCTCGGTCCAACAAACCAGAGGAATTTCCTGATACTTTTATTGAATGGGTGACTTTTGGACAGACACTTTGCCATTGA 2535 0.4241 MASSDNFQSSHSPHSSSLSGETIPPPNLCMQKFRLYETLSNFYMIGRDKSRTYWRVLKIDRLDPSELNVLEDSATYTERECSDLLRRINEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRKIGSICGHIVYAISKTEMIPLPNSSVRSNIINSKNENRYKKLLCTVDLTKDFFFSYSYHIMRSLQRNMCDPETGHVLYETMFVWNEYLTRGIRNQLQNTFWTVALVYGFFKQDTLEISGREFILTLIARRSRHYAGTRYLRRGVNDKGRVANDVETEQIIFEDVPEGLPIPISSVIQNRGSIPLFWSQETSRLNIKPDIIVSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTQEKKPREAILRQEFANAIEFINKDLSEDNRLRFLHWDLHKHFHSKATNVLLLLGKVAAYALALTGFFYCQASSTLRPEDCLKWPPTDDSVKGSFSATVHAEYDNEDANDLERKPSDGINISDENHSAKSPRLQKGVLRTNCIDCLDRTNVAQFAYGLAAIGHQLHSLGIIQHPSIDLDDPVANDLMQFYERMGDTLAHQYGGSAAHNKIFSARRGQWKAATQSQEFFRTLQRYYSNAWMDAEKQDAINVFLGHFQPQQGMPALWELRSDQHYGTGRLGDDDTRSFIKRSFSDGNILRDSSTPMSAPNAKNEKFSNPGLPDRSGEGSKAFCESSPEISTTETESDISLSRYTPTMPRKQLFVDMQRERCAESHHIYYSEQGDSFSCSNFVDLDWLSSSANSCEEEPYERSSITNSPIDGLSSENVVNGVIVGETTASASDWASTSIKERDSTEPEISYGDARSNKPEEFPDTFIEWVTFGQTLCH* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3502 844 MobiDBLite consensus disorder prediction 691 708 - -
Tpr2g3502 844 MobiDBLite consensus disorder prediction 656 708 - -
Tpr2g3502 844 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 19 844 - -
Tpr2g3502 844 MobiDBLite consensus disorder prediction 805 825 - -
Tpr2g3502 844 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 19 844 IPR043573 GO:0043813|GO:0046856
Tpr2g3502 844 MobiDBLite consensus disorder prediction 800 825 - -
Tpr2g3502 844 MobiDBLite consensus disorder prediction 466 489 - -
Tpr2g3502 844 MobiDBLite consensus disorder prediction 656 671 - -
Tpr2g3502 844 Pfam SacI homology domain 105 401 IPR002013 GO:0016791
Tpr2g3502 844 MobiDBLite consensus disorder prediction 1 23 - -
Tpr2g3502 844 ProSiteProfiles Sac phosphatase domain profile. 169 562 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3502 Tpr-Chr2 38306560 38316129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3502 29 844 Acyl Lipid Metabolism Gene Families AT5G20840 60.146 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3502 K22913 - gmx:100810079 1403.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3502 2 38306560 38316129 Tpr7g0748 7 6657775 6668105 ECH
Tpr2g3502 2 38306560 38316129 Tpr2g3502 2 38306560 38316129 ECH