Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3501 ATGGGAAGAGAAACAGCAAAGGCGCAACAAGGAACTGCTTACACTGTTGAGCAACTAGTTGCATTCAATCGCTACAATCCCGATATTCTTCCAGATCTCGAAAACTATGTCAATGAGCAGGTTTCATCACAGACGTATAGTCTTGAATCCAATCTCTGCCTTCTTCGCCTTTACCAGTTTGAGCCTGAGAAGATGAGTTCTCAGATTGTAGCTCGCATATTGGTTAAGGCCCTCATGGCTATGCCAGCTCCAGATTTCAGCCTGTGTTTGTTTTTGATTCCGGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCTCACTATTTGGAGACTGGAAGGTTTCGTCAGTTCTGGGATGAAGCAGCAAAAAGTCGTCATATAGTTGAAGCTGTGCCTGGATTTGAGCAGGCAATCCAAGACTATGCAATTCATGTCCTATCCTTGACTTACCAAAGGATTCCCAGAACTGTGCTTGCTGAGGCTATCAACATAGAAGGTTTAGCCTTGGACAAATTCCTTGAACATCAAGTAGCCAACTCTGGTTGGGTTATTGAGAAAAGCCAGGGCAGGGGTCAACTCATTGTCCTTCCCAGAGATGAATATAATGATCCAATTTTGAAGAAAAACACTGCAGATAGTGTACCATTCGAGCACATTGCTCACATCCTCAATAATCTTAGTTGA 696 0.4353 MGRETAKAQQGTAYTVEQLVAFNRYNPDILPDLENYVNEQVSSQTYSLESNLCLLRLYQFEPEKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQDYAIHVLSLTYQRIPRTVLAEAINIEGLALDKFLEHQVANSGWVIEKSQGRGQLIVLPRDEYNDPILKKNTADSVPFEHIAHILNNLS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3501 231 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 7 231 IPR009374 GO:0003743|GO:0005737|GO:0005852
Tpr2g3501 231 SUPERFAMILY "Winged helix" DNA-binding domain 136 228 IPR036390 -
Tpr2g3501 231 ProSiteProfiles PCI domain profile. 46 205 IPR000717 -
Tpr2g3501 231 Gene3D ARM repeat; domain 1 7 124 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Tpr2g3501 231 Gene3D - 127 231 IPR036388 -
Tpr2g3501 231 Pfam CSN8/PSMD8/EIF3K family 66 192 IPR033464 -
Tpr2g3501 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 10 228 - -
Tpr2g3501 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 10 228 IPR009374 GO:0003743|GO:0005737|GO:0005852
Tpr2g3501 231 SUPERFAMILY ARM repeat 9 133 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3501 1 227 Eukaryotic Initiation Factors Gene Family AT4G33250 73.568 2.99e-125 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3501 K15028 - gmx:100306445 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3501 2 38299524 38301973 Tpr2g3501 2 38299524 38301973 ECH