Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3496 ATGGTTCATGTTGAAACTGAAGCAAAATTATTGGCTACACTAACACTACTGCTTCTCTTCCATCTTATTATCCCAATAATCTCAACATTTTCCGAATCAAACCTTCACCATGATATGACCTTGTTAGATGAGCAATTAAAAGCGGCGGAGGATGGTGCCATTAGAGTGGTGAGAGTTCGGAAAGACGGAACCGGAGATTTTAAGACGATAACTGACGCCGTCAATAGCATTCCGTCGGGGAACATGAGAAGAGTGGTGGTGTGGATTGGTATGGGGGAATATAGAGAGAAAATAACGGTTGATATGTCAAAACGTTTTGTAACGTTTTATGGGGAAAGGAATGGGAATGAAAATGACATAATGCCCATTATAACGTACGATGCAACTGCTTTGCATTATGGGACACTTTATAGTGCAACCGTCGCTGTTGATGCTGATTACTTTGTTGCTGTCAATGTTGCATTTGTGAACTCGTCTCCTATGCCAAATGAAAATAGTGTTGGAGGACAAGCGTTAGCGATGAGGATATCAGGGGACAAGGCTGCATTCTACAATTGCAAGTTCATTGGATATCAAGATACTTTGTGTGATGACAAAGGCAGACATTTTTTTAAGGATTGCTATATTCAAGGAACCTATGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAAAACTACCATAAAATCGGTTGGAAAGGGTTTGAAAGTTATAACAGCACAAGGTAGGGAAAGCATATCAGAAGATACTGGATTCACTTTTGTGCATTGCAAAATAATCGGATCTGGTCACAGGAACACTTACCTCGGCCGTGGTTGGAGGAGGAGCCCTAGGGTAGTGTTTGCCTATACTTTTATGGACTCTGGTGTCAATTCTAGAGGATGGTACCACCATGAATCCAATGAGACAATCTATTTTGGAGAATATAAGTGCATTGGACCAGGTGCTGCTTCTTCCTCTTCAAGTAGGATACTATCTGATGAAGAAGCTAAACCCTTCTTGAGCATGGCTTATATTCATGGAGAACAATGGGTTCGCCCACCTCCCAAACTGTAA 1059 0.4108 MVHVETEAKLLATLTLLLLFHLIIPIISTFSESNLHHDMTLLDEQLKAAEDGAIRVVRVRKDGTGDFKTITDAVNSIPSGNMRRVVVWIGMGEYREKITVDMSKRFVTFYGERNGNENDIMPIITYDATALHYGTLYSATVAVDADYFVAVNVAFVNSSPMPNENSVGGQALAMRISGDKAAFYNCKFIGYQDTLCDDKGRHFFKDCYIQGTYDFIFGNGKSIYLKTTIKSVGKGLKVITAQGRESISEDTGFTFVHCKIIGSGHRNTYLGRGWRRSPRVVFAYTFMDSGVNSRGWYHHESNETIYFGEYKCIGPGAASSSSSRILSDEEAKPFLSMAYIHGEQWVRPPPKL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3496 352 PANTHER PECTINESTERASE 45 351 - -
Tpr2g3496 352 Pfam Pectinesterase 57 342 IPR000070 GO:0030599|GO:0042545
Tpr2g3496 352 Gene3D - 53 349 IPR012334 -
Tpr2g3496 352 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 45 351 - -
Tpr2g3496 352 SUPERFAMILY Pectin lyase-like 56 348 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3496 Tpr-Chr2 38228315 38230885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3496 42 352 Carbohydrate Esterase AT5G07410 49.842 1.34e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3496 K01051 - gmx:100790786 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3496 2 38228315 38230885 Tpr2g3496 2 38228315 38230885 ECH