Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3495 ATGGACGACGCCGGAGTCTCCAAATTAACTGCTAAGTTGAAGGAAATATTTCAAAAGTGGCAATTAGGTTCTAAAGAGTGCAATGATGAACAACATTCTGGTGTGAATCATGGTGGTATATCACCAATGATTACCAAAAGGTTAAACAGTTTAGTATACTGTGATTCTGATGAAGATAGTTGCAATAGTCCTAAACCACCACATGATGTTCCTAAAGGGTACTTAGCTGTTTATGTTGGACCAGAACTTAGGAGATTCATCATTCCAACAAGCTACCTTAGTCACTCTCTTTTCAAAATGTTGTTGGAAAAAGCTGCTGATGAATTTGGTTTTGATCAGAGTGGTGGACTTACAATTCCATGTGAAATTGAGACTTTTAAATATCTTCTCAGCTGCATGGAGAGTACTCAGCTTCATCATGTTGATGATGATGACACCTCTGCTGGAAACAAAGGAACTTTGGAAGAGAGAATAAACTAA 480 0.3771 MDDAGVSKLTAKLKEIFQKWQLGSKECNDEQHSGVNHGGISPMITKRLNSLVYCDSDEDSCNSPKPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAADEFGFDQSGGLTIPCEIETFKYLLSCMESTQLHHVDDDDTSAGNKGTLEERIN* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3495 159 PANTHER SMALL AUXIN-UP RNA-RELATED 5 143 - -
Tpr2g3495 159 Pfam Auxin responsive protein 61 132 IPR003676 GO:0009733
Tpr2g3495 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 143 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3495 Tpr-Chr2 38223956 38226410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3495 1 156 Calmodulin-binding Proteins AT3G43120 58.788 6.36e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3495 K14488 - gmx:100795275 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3495 2 38223956 38226410 Tpr2g3495 2 38223956 38226410 ECH