Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3486 ATGCAAACACTCACACTCATGCTCTTGTTTATTTCACCATTGTTTCTTCCATTCTCAACCGCGGCAAAAACACCGCAAGATCTCCTCCGTTCATCATGTGCACAAGCAAGATATCCAACTCTTTGCGTCCAAACACTCACAAACCAAGTAACTTCCACCACAAAGCCATTAGACCTAGCTCAAGCCGCCGTAAAAGCCAGTCTCACTCGCACACTCACTCTTTCCGTTTACCTCAAAAACACCCTAAAATCACAGGTGAAACCGGCGGTGGAGTCCACCGCCAGCAACAGAAAACGAGTTGCCCTAAATGATTGTGTTGCTCAGATTACTGACTCAGTTTCGGAGTTAAACCAGACGTTAAATGAGCTAAAGCATCTTCATATGGGAACTTTTGAGTGGCAAATAAGTAACGCTCAAACATGGGCTAGTACTGCTATAACAAATGGTAACTTATGTGTTAATGGTTTGAATAGGAAAGGTGCTGAAGAGAAGGTGAAGATGGAAGTGAAACGTAGGGTTAAGGATGTTTCTATGTTTACTAGTAATGCTCTTTACTTTATCAGTAAACTTGGTGAAAGTAGGAATCCAAAACCTCACTCAAATTCCAAGAACAGAGTGTATCTTTGA 627 0.4195 MQTLTLMLLFISPLFLPFSTAAKTPQDLLRSSCAQARYPTLCVQTLTNQVTSTTKPLDLAQAAVKASLTRTLTLSVYLKNTLKSQVKPAVESTASNRKRVALNDCVAQITDSVSELNQTLNELKHLHMGTFEWQISNAQTWASTAITNGNLCVNGLNRKGAEEKVKMEVKRRVKDVSMFTSNALYFISKLGESRNPKPHSNSKNRVYL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3486 208 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 4 199 - -
Tpr2g3486 208 SMART PMEI_2 24 186 IPR006501 GO:0004857
Tpr2g3486 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 3 190 IPR006501 GO:0004857
Tpr2g3486 208 Coils Coil 106 126 - -
Tpr2g3486 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 190 IPR035513 -
Tpr2g3486 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 191 IPR035513 -
Tpr2g3486 208 CDD PMEI-like_3 31 190 - -
Tpr2g3486 208 Pfam Plant invertase/pectin methylesterase inhibitor 28 184 IPR006501 GO:0004857
Tpr2g3486 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3486 Tpr-Chr2 38181010 38182039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3486 28 190 Carbohydrate Esterase AT3G14310 29.697 1.09e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3486 - - mtr:MTR_4g124855 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3486 2 38181010 38182039 Tpr2g3486 2 38181010 38182039 ECH