Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3483 ATGAAGGCTCCATCCAATGGTTACTTGCCTAATTCTGGAGATGGGGAAAGGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCCGGACCTTTGGTTTCTTTGCCTCCTGTCGGTAGCCTTGTGGTTTATTTCCCTCAAGGACACAGTGAGCAAGTTGCAGCTTCTATGCAAAAGCAGACCGACTTCATACCTAGTTACCCTAACCTTCCTTCCAAGTTGATTTGCATGCTTCACAATGTTGCTCTTCATGCTGATCCTGAAACTGACGAGGTCTATGCACAGATGACCCTTCAACCTGTAAACAAATATGACAAGGAAGCAATACTGGCATCAGATTTTGGTCTCAAACAAAACCGTCAACCTACGGAATTCTTTTGCAAAACTCTAACAGCTAGTGACACAAGCACTCATGGAGGATTTTCTGTTCCTCGTAGAGCAGCTGAGAAAATATTCCCGCCTTTGGATTTTTCAATGCAACCTCCCGCTCAGGAGCTTGTTGCTAAAGATTTGCATGACAATACATGGGCATTTAGACATATTTATCGGGGACAACCAAAGAGGCATTTATTGACTACTGGTTGGAGTGTATTTATCAGCACAAAAAGACTTTTTGCTGGAGATTCTGTTCTTTTTATCAGAGATGAAAAACAGCAACTGCTTTTAGGTTTGAGGCGTGCTAATAGACAGCAGCCAGCGCTTTCTTCATCAGTAATCTCTAGTGACAGTATGCATATTGGCATTTTAGCTGCTGCAGCTCATGCTGCTGCAAATAACAGTCCATTTACTATATATTACAATCCAAGGGCCAGCCCTTCCGAATTTGTTATTCCGTTGGCCAAGTATAACAAAGCCATGTACACTCAAGTTTCTCTTGGAATGAGATTTAGAATGATGTTTGAAACGGAGGAGTCTGGTGTACGTCGATATATGGGTACAGTTACTGGAATTAGTGACTTGGATCCTGTCCGATGGAAAAATTCACAATGGCGCAATCTTCAGATTGGATGGGATGAATCAACAGCTGGTGAACGCCCAAGCAGAGTCTCGATTTGGGACATTGAGCCAGTAGTGACTCCTTTCTATATCTGTCCACCTCCATTTTTTAGGCCCAAGTTCCCCAGGCAACCTGGAATGCCAGATGACGACTCTGATGTCGAAAATGCTTTCAAGAGAGCTATGCCCTGGCTTGGAGATGACTTTGGCATGAAGGACGCCTCAAGTTCAGGCTTCCCTGGTTTGAGTTTAGTGCAGTGGATGCAGATGCAGCAGAATAATCAGTTTTCAGCTGCTCAATCAGGATGTTTTCCATCCATGCTCTCATCTAATACTCTGCATGGTAATCTTAGCACCGACGACCCATCCAAATTACTAAGTTTCCAAGCTCCAGGCCTCTCTGCACCGAGTCTTCAATTTAACAAACCTAATTTACCAAATCAAACCAACCAATTGCATCAGTCCCCAACATCATGGCCTCAGCAGCAACAACAACAACAGTTACAGAACTTACAGCAACAGCAACAACAGTTACAGAACTTACAACAACAGCAACAACAACAGCTACAGCAGCAACAACAGCAGCAGTTGCAGTCATTGTCGCAAATACCGATGAACCAGTTCCAGCAGCAGAGGCAACAACAGCTGCCTGAATCACAAAACCTGACTCTGCTGCAACAACAAATGTCTCAGCAGCTAGGACAGCAGCCACAGAAGCAACCACAGTCATCTCAACAGGCTATTCTGAATAATGGTATAGTTGCTTCTAACCAGAATACAAATCAGTTTGCTCAGCAGCAAACACTGGCTTACACGCAGCTTCAGCAAAAACAACAATTGCTCCCAGGAAGTATCCCACTCCAACAAAGTACCCAATCAGCCAGTAAGAATACATTCCCACTGACATCCCTACCACAAGACTCACAATTTCATCAACATATAGACCAGCAACCGAGTCTCTTACAGAGGCAGCAACAACAAACACAATTACAACAATCTTCACTGCAGGCATTACAGCAAAGCCAGCCACAGTGGGTGCCACCAAATCTTCCAGTGACTCAAACGTCTCAACAAAACACTTCGGAGCAACAACTGCAGCTACAGTTTTTGCACAAATTGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAATTTCTTTCATCATCTGGCCCACTTTTGCAATCTCAGCTTTTACAGAAACAAAATACTCACCAACAAAACCAGCAATTACCGCAGATGCCTATATCCCAACATCATAATCAACAGCTTGGCAATAACGCATTTTCAACGGAGAAGCGTCTCAACAGCAACAATTTTTCTTCTTCGTCTCTTATGCAATCACAGCAGCTTTCTGTGAATCAAACCCCGAATACGCAGAAGCCACGCACAATTACTAGAGTTCCCTCTACACTTACTGATGGAGAGGCTCCATCATGCTCAACTTCACCATCTACTAATAACTGCCAGATATCTCAACCAAATCTCCTGAAAAGAAATCAACAAGTACAAACTACAATAGGCGGGATCTTGGTAGTGGAGCCTGCCAATAATCTGACACAGGACCTTCAGAGTAAGTCTGACATGCATATCAAACAAGAGTTCTCAAATGTAAAAGGACCTGACCAACTAAAGTATAAAGGGGCTACTACTGATCAGCTCGAAGCTTCATCTGGAACATCTTACTGTCTGGATCCCGGTAATGTCCAGCAGAGTTTGCCATTATCCAACTTCTGCATGGAAAGTGATGTCCAATCGAACCCTCGAAACACTCTGCCATTTGAAACTAATTTTGATGGTCTAATGTCTGATACTATGCTTTCTAGGGGTTATGACTCTCAAAAAGATCTTCAAAATTTGTTGGCTAATTATTGTGGTGCTCCAGGAGACATTGAAACCGAGCTGTCCACTGCTGACATCAGTTCACAGTCATTTGGATTACCCGACTTGGCTTTTAAGCCTGGTTGCTCAAATGATGTTGGCATTGATGATACTTCTGGGGTTTTGAACAATGGCGTGCGGGCAAACCAAACTCAACGAATGCGAACATATACCAAGGTTCAAAAGCGTGGCTCTGTCGGAAGATGTATTGATGTAACCCGCTACAAGGGATATGATGAACTGCGGTATGATTTGGCACGAATGTTTGGAATTGAAGGGCAACTGGAAGATCCTCAAAGGACTGACTGGAAATTAGTATACGTGGATCATGAGAATGACATTCTTCTTGTTGGTGATGACCCTTGGGAGGAATTTGTAAGTTGTGTTCAGAGTATAAAGATATTATCATCAGCTGAGGTGCAGCAAATGAGCTTGGATGGAGATTTAGGTGGTAATGTTCCAATCCCAAATCAAGCATCCAGTGGGACAGATAGTGGCAATGCATGGAGGGGACAGTATGATGATAACTCTGCAGCCTCGTTCAATAGGTGA 3429 0.436 MKAPSNGYLPNSGDGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDFGLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFISTKRLFAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIYYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPRQPGMPDDDSDVENAFKRAMPWLGDDFGMKDASSSGFPGLSLVQWMQMQQNNQFSAAQSGCFPSMLSSNTLHGNLSTDDPSKLLSFQAPGLSAPSLQFNKPNLPNQTNQLHQSPTSWPQQQQQQQLQNLQQQQQQLQNLQQQQQQQLQQQQQQQLQSLSQIPMNQFQQQRQQQLPESQNLTLLQQQMSQQLGQQPQKQPQSSQQAILNNGIVASNQNTNQFAQQQTLAYTQLQQKQQLLPGSIPLQQSTQSASKNTFPLTSLPQDSQFHQHIDQQPSLLQRQQQQTQLQQSSLQALQQSQPQWVPPNLPVTQTSQQNTSEQQLQLQFLHKLQQQQQQQQQQQQFLSSSGPLLQSQLLQKQNTHQQNQQLPQMPISQHHNQQLGNNAFSTEKRLNSNNFSSSSLMQSQQLSVNQTPNTQKPRTITRVPSTLTDGEAPSCSTSPSTNNCQISQPNLLKRNQQVQTTIGGILVVEPANNLTQDLQSKSDMHIKQEFSNVKGPDQLKYKGATTDQLEASSGTSYCLDPGNVQQSLPLSNFCMESDVQSNPRNTLPFETNFDGLMSDTMLSRGYDSQKDLQNLLANYCGAPGDIETELSTADISSQSFGLPDLAFKPGCSNDVGIDDTSGVLNNGVRANQTQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGGNVPIPNQASSGTDSGNAWRGQYDDNSAASFNR* 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3483 1142 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1130 IPR044835 GO:0003677|GO:0006355|GO:0009725
Tpr2g3483 1142 Gene3D - 1009 1103 - -
Tpr2g3483 1142 MobiDBLite consensus disorder prediction 772 820 - -
Tpr2g3483 1142 Gene3D - 289 360 - -
Tpr2g3483 1142 SMART B3_2 126 228 IPR003340 GO:0003677
Tpr2g3483 1142 CDD B3_DNA 125 217 IPR003340 GO:0003677
Tpr2g3483 1142 Pfam AUX/IAA family 1008 1100 IPR033389 -
Tpr2g3483 1142 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Tpr2g3483 1142 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Tpr2g3483 1142 Coils Coil 493 530 - -
Tpr2g3483 1142 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Tpr2g3483 1142 ProSiteProfiles PB1 domain profile. 1014 1107 IPR000270 GO:0005515
Tpr2g3483 1142 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Tpr2g3483 1142 PANTHER AUXIN RESPONSE FACTOR 19 1 1130 - -
Tpr2g3483 1142 Gene3D - 124 227 IPR015300 -
Tpr2g3483 1142 SUPERFAMILY CAD & PB1 domains 1027 1092 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3483 Tpr-Chr2 38123321 38130488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3483 1 487 B3 DNA Binding Superfamily AT1G19220 83.162 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Tpr2g3483 AUX_IAA 2e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3483 K14486 - gmx:100816054 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3483 2 38123321 38130488 Tpr2g3483 2 38123321 38130488 ECH