Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3464 ATGACTGTGATGAAATTTACGTGGAAATTGATATTTCCAAGTTGTTATAAGGGTGAAGGTGATTACTCTTCGCCCAAACCAGTAGCAGCAACGAAAGTTGTTGCTACAACAAAAGATGTTGTTGCAACAAAGACAAATTCTTTTAACAGAATTTCTCTGACGGATCTGAGTTTTCCAAGTGCTACAACACTTTCAGATGATCTTTCAATATCTTTAGCTGGTTCTAATCTATATGTTTTTACACATGCTGAGCTTAAGATAATTACTCAGAGCTTTTCTTCTAGTAATTTTCTTGGTGAAGGAGGTTTTGGACCTGTTCATAAAGGGTTCATTGATGATAAGGTTAGAGCTGGACTTGAACCTCAACCTGTGGCTGTTAAGCTTCTAGATTTGCATGGTTCTCAAGGTCATAAAGAATGGCTGACTGAGGTTGTGTTTCTTGGTCAATTGAGACATCAACACCTTGTGAAGCTGATTGGATATTGTTGTGAAGAGGAGCATAGGCTTTTGGTTTATGAGTATTTACCAAGAGGAAGCTTAGAACATCAACTATTTAGAAGATATTCAGCATCATTACCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAAGGTGTAGCCTTTTTACATGAAGCAAAGAAACCAGTTATATATAGAGATTTCAAAGCTTCAAACATCTTATTAGACTCTGATTATAATGCAAAACTCTCTGATTTTGGCTTGGCAAAAGATGGTCCAGAAGGAGATGATACACATGTTTCCACTAGAGTTATGGGTACTCAAGGTTATGCTGCCCCGGAATACATCATGACAGGACATTTGACAGCAATGAGTGATGTGTATAGTTTTGGAGTTGTCTTATTGGAACTATTAACCGGTAGAAGATCAGTGGACAAAACACGTCCACCAAGAGAACATAATTTAGTGGAATGGGCCAGACCAGTTTTAAACGATGCTCGTAAACTTAGTAGAATAATGGATCCAAGACTTGAAGGACAGTATTCTGAATCAGGAGCAAGAAAAGCAGCTGCATTAGCTTATCAATGTTTAAGTCATAGACCAAGAAATAGACCTTCAATGTCTATAGTAGTTAACACTCTTGAACCTCTTCAAAATTATGTAGATATTCCAATTGGTCCTTTTGTTTATACAGTTCCAAGTGATGTTAGTAACAATGAAGTTCAAAAAGAGAGTAGTAATGGTAATACTGGTAATACTACTCCTGCTGAGACACCAAAGGAGAGATCAAGAAGAAATAGTACTAGTACTCATCATCGTAGAAATCAACATCAAAGTAATGGTAATGGTACTACTAATCATAAGCATATTGTTATAGATAAAAATAATGCTAATGAAGTGATTAAAGATGGAGAAGAATATTATGATACACCTAAGGAGAAGAAGAGAGAAAATGGTAATCATCATAGAAGTCATCATCATCATAGGCACAATGGACATAGGCATCCACAAAAGTCACCAAAAACAAAGTCACAAAATGAGCTAGGACATGAACAAAATGGGTCACACTCAAATTCACCAGATACATCTATTACATCAGAAAGCCAAGGAAATTAA 1581 0.3624 MTVMKFTWKLIFPSCYKGEGDYSSPKPVAATKVVATTKDVVATKTNSFNRISLTDLSFPSATTLSDDLSISLAGSNLYVFTHAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKVRAGLEPQPVAVKLLDLHGSQGHKEWLTEVVFLGQLRHQHLVKLIGYCCEEEHRLLVYEYLPRGSLEHQLFRRYSASLPWSTRMKIAVGAAKGVAFLHEAKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKTRPPREHNLVEWARPVLNDARKLSRIMDPRLEGQYSESGARKAAALAYQCLSHRPRNRPSMSIVVNTLEPLQNYVDIPIGPFVYTVPSDVSNNEVQKESSNGNTGNTTPAETPKERSRRNSTSTHHRRNQHQSNGNGTTNHKHIVIDKNNANEVIKDGEEYYDTPKEKKRENGNHHRSHHHHRHNGHRHPQKSPKTKSQNELGHEQNGSHSNSPDTSITSESQGN* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3464 526 MobiDBLite consensus disorder prediction 428 443 - -
Tpr2g3464 526 MobiDBLite consensus disorder prediction 394 443 - -
Tpr2g3464 526 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 35 435 - -
Tpr2g3464 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Tpr2g3464 526 Gene3D Transferase(Phosphotransferase) domain 1 175 378 - -
Tpr2g3464 526 SUPERFAMILY Protein kinase-like (PK-like) 67 371 IPR011009 -
Tpr2g3464 526 ProSiteProfiles Protein kinase domain profile. 92 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3464 526 PANTHER OS01G0588500 PROTEIN-RELATED 35 435 - -
Tpr2g3464 526 MobiDBLite consensus disorder prediction 473 494 - -
Tpr2g3464 526 Gene3D Phosphorylase Kinase; domain 1 57 174 - -
Tpr2g3464 526 MobiDBLite consensus disorder prediction 501 526 - -
Tpr2g3464 526 MobiDBLite consensus disorder prediction 467 526 - -
Tpr2g3464 526 CDD STKc_IRAK 98 372 - -
Tpr2g3464 526 Pfam Protein tyrosine and serine/threonine kinase 96 369 IPR001245 GO:0004672|GO:0006468
Tpr2g3464 526 MobiDBLite consensus disorder prediction 394 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3464 Tpr-Chr2 38000504 38003557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3464 80 369 Glycoside Hydrolase AT3G07070 53.925 1.63e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr2g3464 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3464 - - mtr:MTR_4g125260 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3464 2 38000504 38003557 Tpr2g3464 2 38000504 38003557 ECH
Tpr2g3464 2 38000504 38003557 Tpr5g0850 5 15521374 15524877 PCT