Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3451 ATGGGGAGAAGCCCTTGTTGTGCAAAGGAAGGCTTGAATAGAGGTGCTTGGACAACTCATGAAGACAAAATCCTCACTGAATACATTAAGCTCCATGGTGAAGGAAAATGGAGAAACCTTCCAAAAAGAGCAGGCTTAAAAAGATGTGGGAAAAGTTGTAGACTTAGATGGTTGAATTATCTAAGACCAGATATCAAGCGAGGTAATATATCCTCGGATGAAGAAGAACTTATCATCCGACTTCACAAACTACTCGGAAACAGATGGTCTCTAATAGCCGGAAGACTTCCAGGGCGAACAGACAATGAAATAAAGAATTACTGGAACACAAATTTAGGAAAAAAAGTTAAGGATCTTAATCAACAAAACACCAACAATTCTTCTCCTACTAAACCCTCTACTCAACCAAAAAATGCAAAGATCAAACAGAAACAGATCAATCCTAAGCCAATGAAGCCAAACTCAAATGTTGTCCGTACAAAAGCTACTAAGTGTTCTAAGGTATTGTTCATAAACTCACCCCCCAACTCATCATCACCAATGCATAATTTGCAGAACAAAGCTGAGGCAGAGACAACAACAAAGCCATCAAAGCCATCAATGCTGGTTGATGGTGTGGCTAGTGATTCTATGAGTAACAACGAAATGGAACGCGGTGATGGATTTTTGTCATTTCGTGATGAAGAGAAAGAACTATCCGCAGATTTGCTAGACGATTTTAACATTGCGGATGATATTTGCTTATCTGAACTTCTAAACTCCGATTTCTCAAATGCGTGCAATTTCGATTACAATGATCTATTGTCGCCTTGTTCGGACCAAACTCAAATGTTCTCTGATGATGAAATTCTCAAAAACTGGACACAATGTAACTTTGCTTATGAGACAAATGTGTCCAACAATCTTCATTCTTTTGCTTCCTTTCTTGAATCCAGCGAGGAAGTACTAGGAGAATGA 957 0.3887 MGRSPCCAKEGLNRGAWTTHEDKILTEYIKLHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISSDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDLNQQNTNNSSPTKPSTQPKNAKIKQKQINPKPMKPNSNVVRTKATKCSKVLFINSPPNSSSPMHNLQNKAEAETTTKPSKPSMLVDGVASDSMSNNEMERGDGFLSFRDEEKELSADLLDDFNIADDICLSELLNSDFSNACNFDYNDLLSPCSDQTQMFSDDEILKNWTQCNFAYETNVSNNLHSFASFLESSEEVLGE* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3451 318 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Tpr2g3451 318 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Tpr2g3451 318 PANTHER TRANSCRIPTION FACTOR TT2 1 277 - -
Tpr2g3451 318 CDD SANT 16 61 IPR001005 -
Tpr2g3451 318 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 277 - -
Tpr2g3451 318 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Tpr2g3451 318 MobiDBLite consensus disorder prediction 174 197 - -
Tpr2g3451 318 Gene3D - 14 66 - -
Tpr2g3451 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Tpr2g3451 318 SMART sant 13 63 IPR001005 -
Tpr2g3451 318 SMART sant 66 114 IPR001005 -
Tpr2g3451 318 CDD SANT 71 112 IPR001005 -
Tpr2g3451 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Tpr2g3451 318 Gene3D - 71 149 - -
Tpr2g3451 318 MobiDBLite consensus disorder prediction 120 157 - -
Tpr2g3451 318 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Tpr2g3451 318 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3451 Tpr-Chr2 37900328 37901772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3451 1 191 MYB Transcription Factor Family AT4G38620 53.125 3.75e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr2g3451 Myb_DNA-binding 6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3451 K09422 - gmx:100781908 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3451 2 37900328 37901772 Tpr2g3451 2 37900328 37901772 ECH