Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g3425 | ATGGAACCTCGTGTTGGGAATAAGTTTCGTTTGGGTAGGAAGATCGGTAGCGGCTCATTTGGGGAGATCTACTTAGGTACTAATATTCAAACTAACGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACTAAGCATCCTCAGTTGCTATACGAGTCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTGGAGGGAGACTACAATGTTTTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTTTGTAGTAGAAAGTTATCACTCAAGACAGTTCTTATGCTTGCTGATCAGATGATCAACCGTGTTGAGTTCATTCATTCAAAATCAATGCTACATCGAGATATCAAGCCAGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTCGGTTTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAAAATTTAACCGGCACCGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAACAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGAAGTCTTCCCTGGCAGGGACTTAAAGCAGGAACTAAGAAACAGAAGTATGATAGAATCAGTGAAAAAAAGGTCAATACATCGATTGAAGCTTTATGTCGGGGTTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGCTCATTAAGGTTTGATGATAAGCCAGATTACGCTTATCTCAAAAGGATATTTCGCGACCTGTTTATTCGTGAAGGATTCCAGTTTGATTACGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAGCTTGCAACACCTCCAACACGGGCCATTGTACCTGGTGCTGGAACCAGTTCTGCAATGCCACCTGCTGATAGACACGCAGGAGCAGAAGAAGGGCAACCCCCCGGTTTGGTTTCGGGGGATTCCTCGAGGCGTAGAATGTCAGGACCCATTTTGAATACTCTATCAAGTTCCAATGCCTTGGGTCAGTCAAGTGGATCTAGGCGAGTTGCTGTTTCTAGTAGTCGTGATGCATTTACTGGTGCTGAGTCAGATATTCGTACACGCACTGCTGAGGCTAGCCCTGGGGCAGCACACAGAATTTTGGGTGGGCAAAGGAGTTCACCAATTGGATCTTCTGATCCCCAAAGACTATCACGGGCTGGGAGAAATGCTTCTCAAGCCAATAATTATGAAAGTGCCCTTAGGGGCATGGAGGGTTTGCAGTTAGAGAATGATGAGAGGACCCATTATTAA | 1350 | 0.4311 | MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSMLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDRISEKKVNTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPTRAIVPGAGTSSAMPPADRHAGAEEGQPPGLVSGDSSRRRMSGPILNTLSSSNALGQSSGSRRVAVSSSRDAFTGAESDIRTRTAEASPGAAHRILGGQRSSPIGSSDPQRLSRAGRNASQANNYESALRGMEGLQLENDERTHY* | 450 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g3425 | 449 | ProSiteProfiles | Protein kinase domain profile. | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g3425 | 449 | MobiDBLite | consensus disorder prediction | 404 | 431 | - | - | |
Tpr2g3425 | 449 | Pfam | Protein kinase domain | 10 | 227 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g3425 | 449 | PANTHER | CASEIN KINASE I-LIKE | 1 | 431 | - | - | |
Tpr2g3425 | 449 | SMART | serkin_6 | 9 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g3425 | 449 | MobiDBLite | consensus disorder prediction | 303 | 449 | - | - | |
Tpr2g3425 | 449 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 308 | - | - | |
Tpr2g3425 | 449 | PANTHER | CASEIN KINASE-RELATED | 1 | 431 | - | - | |
Tpr2g3425 | 449 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Tpr2g3425 | 449 | MobiDBLite | consensus disorder prediction | 344 | 379 | - | - | |
Tpr2g3425 | 449 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr2g3425 | 449 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 290 | IPR011009 | - | |
Tpr2g3425 | 449 | CDD | STKc_CK1_delta_epsilon | 8 | 282 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g3425 | Tpr-Chr2 | 37698498 | 37704851 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g3425 | 7 | 223 | EF-hand Containing Proteins | AT2G17890 | 26.667 | 5.39e-14 | 72.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Tpr2g3425 | Pkinase | 2.5e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g3425 | K02218 | - | gmx:100785851 | 829.706 |