Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3421 ATGGCGGTGTCTCACGGTGGATACGACGCTGAAATCGGTGGCTCCAAATCTTATCTAATCCCATCAGTTAAACCAGAGTTATTCGATGATAGTGCAGGTTCAAATCCTTGTCAATACGACGACGTTTTAAGCGAAAGAAAAGACTCAGAACTAACCGTAGAAGAAGGTGCTACACCTTCTCACGCTATTCACATCAAAGAAGAAGTTGTTGAAGACGACGGTTCTAACAATTCATCTTCAATCAAGTTTCCAAAACCAATGGAAGGGTTACATGATGCTGGTCCACCACCGTTTCTCAAGAAGACTTATGAAATGGTGGAGGATCCGGAAACCGACCCGATTGTTTCATGGAGTGCTTCTCGTGATAGTTTCATTGTTTGGGACTCTCATGAATTCTCCAAAATCCTTCTTCCAAAGTACTTTAAGCACAATAATTTCTCCAGCTTTATTCGTCAGCTCAACACCTATGGGTTTAGGAAGGTTGATTCAGACCGTTGGGAGTTTGCAAATGAAGGGTTTCAGGGAGGGAAAAAACATTTGCTGAAGACCATAAGAAGGAAAAGTAAGTATAACAAACAACATCAAGGAGGATTCAATTTGATGAAGCCTCCTGTTGAATCTGAAGTGGAGAAACTGAAGAAGGATCAGAACATGTTAAAATTGGAAATTCTGAAGCTAAGGCAGCAACAAGAGAATTCAAATATTCAACTCACAAATGTTCAAGAGCGAGCTCGGCGTGCGGAATTGAAGCAATACCAGATGATGTATTTCCTCACCAAAATGGCCAAAAGGCCATTGTTTATGGAGCAGTTAATCCAAAAGATTAAGCGGAATAGGGAGGTTGATGGTAACATTGACATGGTTAAAAGACCTAAATTGCTTGGAACACAAGGTACTAGTGTAGACTATAGATCTCAGGGTTGTCAACAATTTGCTACTATGCAATCTGAATTGAATGGACTTTTTCCTGAAAATATGAACACTGGTAAAATGGAACCACCACCAGTTCCAACTCGAATGGAAAATGGATTGTGTGACTCTTTGCATGAATTGAAGGCTTGTGGTGGTTCTAGTTCTAGACAAAATGTGCAAGATGTATCTTCTGCTTATCATGTTATGTCAGAGAACCTATTAGGTGAAAATTCTGTTGTTGATGAAGGAATGGATGTGAATGACTCTAATATCTATCTTGAATTAGAGGATTTGATAACTAAGCCAACAGATTGGGGTGGGTCTGCAAGTGGATTGGTGGGACAAACTAGTTAA 1266 0.4005 MAVSHGGYDAEIGGSKSYLIPSVKPELFDDSAGSNPCQYDDVLSERKDSELTVEEGATPSHAIHIKEEVVEDDGSNNSSSIKFPKPMEGLHDAGPPPFLKKTYEMVEDPETDPIVSWSASRDSFIVWDSHEFSKILLPKYFKHNNFSSFIRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKTIRRKSKYNKQHQGGFNLMKPPVESEVEKLKKDQNMLKLEILKLRQQQENSNIQLTNVQERARRAELKQYQMMYFLTKMAKRPLFMEQLIQKIKRNREVDGNIDMVKRPKLLGTQGTSVDYRSQGCQQFATMQSELNGLFPENMNTGKMEPPPVPTRMENGLCDSLHELKACGGSSSRQNVQDVSSAYHVMSENLLGENSVVDEGMDVNDSNIYLELEDLITKPTDWGGSASGLVGQTS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3421 421 Pfam HSF-type DNA-binding 98 187 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3421 421 SUPERFAMILY "Winged helix" DNA-binding domain 94 187 IPR036390 -
Tpr2g3421 421 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 75 408 - -
Tpr2g3421 421 Gene3D - 91 188 IPR036388 -
Tpr2g3421 421 SMART hsfneu3 94 187 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3421 421 Coils Coil 209 243 - -
Tpr2g3421 421 ProSitePatterns HSF-type DNA-binding domain signature. 137 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3421 421 PRINTS Heat shock factor (HSF) domain signature 98 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3421 421 PRINTS Heat shock factor (HSF) domain signature 136 148 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3421 421 PRINTS Heat shock factor (HSF) domain signature 149 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3421 421 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 75 408 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3421 Tpr-Chr2 37682524 37685057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3421 84 322 HSF AT2G26150 48.583 8.27e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tpr2g3421 HSF_DNA-bind 1.3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3421 K09419 - gmx:100818430 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3421 2 37682524 37685057 Tpr2g3421 2 37682524 37685057 ECH