Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3411 ATGGCCCCTCGAATCCTTCTCTGCGGCGACGTTTTTGGCCGCCTTAACCAACTCTTCAAGCGCGTCTCATCGGTTAACAAATCGGCGGGTCCATTCGACGCGCTCTTGTGCGTTGGCCAATTCTTCCCTGACTCACCGGAGCTGCTTGATGAGTTTATGGCATACATTGAAGGTGGATCCCACATTCCCCTTCCTACTTACTTCATCGGCGATTACGGTGTCGCCGCCCCTAAAATCTTGTTGGCGGCTTCTAAGGATTCTGCTAACCTTGGTTTCAAGATGGACGGCTTGAAGGTTTGCGATAATTTGTTTTGGTTGAAAGGCAGTGGCAAATTCAACCTCTTCGGGTTATCTGTGACCTATTTATCTGGTAGGAAATCGTCAAATGTTCAGCAGTTTGGAACTTACAGTGAAGATGATGTTGATGCTTTGCGTGCGATAGCCGAGGAACCTGGAGTTGTTGATTTGTTCTTGACTAATGAATGGCCAAGTAAGGTCACAAATGGAGCAGCTGCTTCAGATATTCCTGCTGGATTCTCAGATTCTACCGGCAGTGATTCAACCATATCAGAGTTAGTACAGGAGATTAAACCACGCTATCATATTGCAGGTTCTAAAGGTATACACTATGCCCGTGAACCATATTCCAATGTTGATGCCGTGCACATTACACGTTTCATAGGGCTTGCGTCTGTTGGAAATAGAGATAAGCAGAAATTTATTCATGCAATTTCTCCAACACCTGCATCCACCATGTCTTCAACTGAGATTGCCATGAAAACCACAAATACCACCTTATCACCATACACATCTGCGGAGGAAAAAGCTTCTCCAAAGGATACTGTAAAGAGACCCAGTGACGGTAGCTCTGATTCTCAACACTGGAGATATGATGTTTCACAAAAGCGACAGAAATATGACACTGGAGATAAGTTGTGTTTCAAATTTACATCTTCTGGCTCTTGTCCACGGGGAGAGACATGCAATTTTCGACATGACACAGATGCAACGGAGCACTGCTTGAGAGGTGTTTGTTTTGAGTTTTTGAACAAGGGAAAATGTGATAAGGGTCCTGATTGCCGCTTTAGGCACAGCTTGCAGGATGAAGGTGATAAGCATCCTTCTAATAGGTCAAGAGAGTGTTGGTTTTGCTTGTCAAGCCCCAATGTGGAGTCACATTTAATCATAAGCATTGGGAATTACTATCTAGCACTGGCTAAAGGTCCACTTGTTGAAGACCATGTGCTGATAATACCTGTTGAGCATATGCCAAATACTTTATCTTTGTCTTCTGAATCTGATGCTGAGCTCTTAAGGTTTCAGAACAGTCTCAAGAGATATTTCAAGAACCAAGAAAAGGAAGTCATATTTTTTGAGTGGGCTTCTGTACGTGGCTTTCATGCCAATCTTCAGGTCATTCCCATTGCGTCTTCCAAAGCAGTTATGGTTGAAAAAGCATTCAACTTAGCTGCACAAAAGTTGGAATTTAAATTTGTGACAAAGAAATTTGATAGTATTTCTGATGGAAGAAAGTTTTTGAAGACGCAAATCGACGGGAATTCAAGCTTGTTCTATGCTGAAATACCAGGAGGTACAATTTTGCTGCACCATGTTGAGGAGAAAGACACATTTCCTGCCCAATTTGGACGTGAGGTTCTGGCAGGGTTGCTTAACATGGCAGATAATGCAGATTGGAGGAATCATAAACATAACAAAGATGAAGAGTTGAAAATAGTTGAAGATTTCAAAGACCGATTTGAAGAATATGATCCAAACCATTGA 1782 0.4265 MAPRILLCGDVFGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPELLDEFMAYIEGGSHIPLPTYFIGDYGVAAPKILLAASKDSANLGFKMDGLKVCDNLFWLKGSGKFNLFGLSVTYLSGRKSSNVQQFGTYSEDDVDALRAIAEEPGVVDLFLTNEWPSKVTNGAAASDIPAGFSDSTGSDSTISELVQEIKPRYHIAGSKGIHYAREPYSNVDAVHITRFIGLASVGNRDKQKFIHAISPTPASTMSSTEIAMKTTNTTLSPYTSAEEKASPKDTVKRPSDGSSDSQHWRYDVSQKRQKYDTGDKLCFKFTSSGSCPRGETCNFRHDTDATEHCLRGVCFEFLNKGKCDKGPDCRFRHSLQDEGDKHPSNRSRECWFCLSSPNVESHLIISIGNYYLALAKGPLVEDHVLIIPVEHMPNTLSLSSESDAELLRFQNSLKRYFKNQEKEVIFFEWASVRGFHANLQVIPIASSKAVMVEKAFNLAAQKLEFKFVTKKFDSISDGRKFLKTQIDGNSSLFYAEIPGGTILLHHVEEKDTFPAQFGREVLAGLLNMADNADWRNHKHNKDEELKIVEDFKDRFEEYDPNH* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3411 593 Gene3D - 376 502 IPR036265 -
Tpr2g3411 593 Gene3D - 302 375 - -
Tpr2g3411 593 CDD MPP_CWF19_N 6 232 - -
Tpr2g3411 593 Pfam Protein similar to CwfJ C-terminus 1 373 487 IPR006768 -
Tpr2g3411 593 SUPERFAMILY CCCH zinc finger 309 336 IPR036855 GO:0046872
Tpr2g3411 593 MobiDBLite consensus disorder prediction 262 302 - -
Tpr2g3411 593 PANTHER CWF19-LIKE PROTEIN 1 1 592 - -
Tpr2g3411 593 SMART c3hfinal6 307 334 IPR000571 GO:0046872
Tpr2g3411 593 SMART c3hfinal6 341 366 IPR000571 GO:0046872
Tpr2g3411 593 ProSiteProfiles Zinc finger C3H1-type profile. 307 335 IPR000571 GO:0046872
Tpr2g3411 593 ProSiteProfiles Zinc finger C3H1-type profile. 344 367 IPR000571 GO:0046872
Tpr2g3411 593 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 1 592 IPR040194 -
Tpr2g3411 593 Pfam Protein similar to CwfJ C-terminus 2 501 590 IPR006767 -
Tpr2g3411 593 SUPERFAMILY HIT-like 380 481 IPR036265 -
Tpr2g3411 593 MobiDBLite consensus disorder prediction 276 302 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr2g3411 CwfJ_C_1 3.4e-36 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3411 K24939 - gmx:100782106 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3411 2 37598327 37605425 Tpr2g3411 2 37598327 37605425 ECH