Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3401 ATGACTCGAAAATTACTTCAACACCAAGAAACACCTCCTTCATCATCATCATCCGCGCCACACCATAGCTCTGGAGCTTTGTTCTTTTTCCTTGGAGGGATTGTAGTGCTAATTATATTGCTCATTATTATCTTTGTATGCTGGAAGCGTCTTAAACGCGCTCCAGCAGAATTATCTGAGAAGACAGCTTCACCACCAAGTCAGACTCAGAAGCATGAAGAAGAAATGATGAAGAAAATTGTCCCAACTAATCAACAATCAGGATTCATGGAGTTCATTAGTGGGAACCTTAGGACAATTAGCTACTTTGATTTCCAGACATTGAGAAAGGCCACGAAGAATTTTCATCGAAGAAATCTTCTTGGAAGTGGTGGATTTGGCCCTGTCTATCAGGGAAAGTTGCTAGATGGAAGGCTAGTTGCTTGTAAGAAACTGTCTCTTGACAAATCTCAACAAGGAGAAAGAGAATTTCTAGCAGAAGTTAGAATGATCACAAGCATCCAGCACAAGAATCTCGTCCGCCTTCTCGGATGTTGCTCAGATGGACCTCAAAGGATACTTGTGTACGAATACATGAAGAACAAAAGTTTGGACCTCTTTATACACGGGAAGAGCGATGAATATCTTAATTGGAGTACTAGATTCCAAATTATTCTTGGAGTAGCGCGGGGATTGCAATACCTTCACGAGGATTCACATGTAAGAATTGTTCACCGAGATATCAAAGCAAGCAACATTCTTCTTGACGAAAAGTTTCAACCGAGGATTGGAGATTTTGGACTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACTCAATTTGCTGGAACATTAGGTTATACAGCTCCTGAATATGCTATTAGAGGAGAACTGTCTGAAAAGGCAGACATCTATAGTTTTGGAGTTCTTGTGCTTGAAGTCATCAGCTGTAGAAAAAACACAGATCTCACTTTACCATCAGATATGCAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAAGTCAATGGTGATGGATCTTATAGATCCAAAACTGAGAGAAAAGGGATATGTAGAAAAAGATGTTATGCAAGCATTTCATGTGGCTTTTTTATGCCTTCAACCACATCCAGATTTGAGACCTGCAATGTCACAGATTGTAGCAATGTTGACATTTAAAATTGACATGGTTACAACACCAATGAGGCCGGCTTTCCTTGATCGAAGGCGTGTAATATTGGATGATGAGAACCATTCTTGGGAAGTTATATCTGAGGTTTTACAAACTCCTGTAGCTAGTGATTCTATGTTATAA 1302 0.4002 MTRKLLQHQETPPSSSSSAPHHSSGALFFFLGGIVVLIILLIIIFVCWKRLKRAPAELSEKTASPPSQTQKHEEEMMKKIVPTNQQSGFMEFISGNLRTISYFDFQTLRKATKNFHRRNLLGSGGFGPVYQGKLLDGRLVACKKLSLDKSQQGEREFLAEVRMITSIQHKNLVRLLGCCSDGPQRILVYEYMKNKSLDLFIHGKSDEYLNWSTRFQIILGVARGLQYLHEDSHVRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEVISCRKNTDLTLPSDMQYLPEYAWKLYEKSMVMDLIDPKLREKGYVEKDVMQAFHVAFLCLQPHPDLRPAMSQIVAMLTFKIDMVTTPMRPAFLDRRRVILDDENHSWEVISEVLQTPVASDSML* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3401 433 ProSiteProfiles Protein kinase domain profile. 115 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3401 433 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 92 401 - -
Tpr2g3401 433 Gene3D Phosphorylase Kinase; domain 1 87 191 - -
Tpr2g3401 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Tpr2g3401 433 SUPERFAMILY Protein kinase-like (PK-like) 97 389 IPR011009 -
Tpr2g3401 433 Pfam Protein tyrosine and serine/threonine kinase 118 386 IPR001245 GO:0004672|GO:0006468
Tpr2g3401 433 PANTHER RECEPTOR-LIKE KINASE 92 401 - -
Tpr2g3401 433 SMART serkin_6 115 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3401 433 CDD STKc_IRAK 121 387 - -
Tpr2g3401 433 Gene3D Transferase(Phosphotransferase) domain 1 192 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3401 Tpr-Chr2 37521894 37524697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3401 103 402 Receptor kinase-like Gene Family AT1G56120 49.667 4.03e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g3401 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3401 - - ccaj:109792436 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3401 2 37521894 37524697 Tpr2g3401 2 37521894 37524697 ECH
Tpr2g3401 2 37521894 37524697 Tpr5g0728 5 12197255 12202186 PCT