Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3394 ATGGGGAACTGTTGGACTAGAAGTCTTCAATCCTCAGGCGATCGTTCCAACTCCAATACTGCTCCTGATACAAACAATCAATCAGGGAGTATTCTGTTTTCTGCCAGACTCAGTAACTTAAGATTGATAAGGAACAGCAATTCCACATCTCTTGGGCGCAGCAGCAACTCTGGAGGAAATAGTAGACTATTTAGTAGTAGTAATAATCACTCAACAGGCAATAACACAAGTACATCCTTTTGGGATTCTGAGAATAGCCAGGCTTCTCGAGTAAGAGATGAGGAAGAGTTCCCTAATGGGCATATCTTGGATGCTGCAAACTTAAAAGTTTTTACTTGGGCAGAACTGAAATCAGCTACTAGAAATTTCCGTCCTGAAAATGTGTTAGGAGAGGGTGGGTTTGGTAAAGTATTCAAGGGTTTGATAAAGGAGGGAGCAGAATCAAAAAAAGGTGGGGGTTTGACTATAGCCATCAAGATATTGAATTCTCACAGTAGGCAAGGACTTGCAGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCCAACCTTGTAAAACTGTTGGGATTTGGGCATGAGGATCGTAAGCTATTTCTCGTGTATGAATTTCAGCCCCGCGGTAGCTTGGACAACCACCTATTTGGAAGAGGTTCAAATGTTCGGCCACTTTCATGGGACAAAAGGCTGAAAGTTATAATTGGAGCAGCTAGGGGACTAAATTTCCTTCACTCGGAGAAAATTATATACAGAGATTTTAAACCCTCAAATATACTACTTGACAAGGTATACACAGCCAAGTTATCAGACTTTGGCATGGCCAGATCTGGTCCTTCTGATGATCACTCTCATGTATCAACACAGGTTGTGGGAACAAGCGGTTATGCCGCCCCGGAGTACGTAGTCACAGGTCATTTGTATGTGAAAAGCGATGTATATGGATTTGGTCTTGTTCTGATGGAGATATTAACAGGTAAGCAGATAGGCGAGATAATGCGCATTGGTGAGCAAACGTCGTTATGTGATTGGCTCAAATCAAACCTATTAAATAGAGCGAAATCGAGAAGCAACATGGATCCAAAGTTGGAAGGCAAGTATCCACCCAACTTAGCTTCACAAATAGCTCAACTTGCTCTCAAATGCATTCAAACAGAGCACAAAATTAGGCCATCAATGAAGGAAGTTGTTGAAACATTGGAAAGTATTGAAGCAGCCAATGATAAACCAGCTGATAACAGAAAAAGGACTAGCAATTCCAGGGAAGTTCAACAACATGGCCAACTAGATGGTAGTTAA 1302 0.4178 MGNCWTRSLQSSGDRSNSNTAPDTNNQSGSILFSARLSNLRLIRNSNSTSLGRSSNSGGNSRLFSSSNNHSTGNNTSTSFWDSENSQASRVRDEEEFPNGHILDAANLKVFTWAELKSATRNFRPENVLGEGGFGKVFKGLIKEGAESKKGGGLTIAIKILNSHSRQGLAEWQSEVNFLGRLSHPNLVKLLGFGHEDRKLFLVYEFQPRGSLDNHLFGRGSNVRPLSWDKRLKVIIGAARGLNFLHSEKIIYRDFKPSNILLDKVYTAKLSDFGMARSGPSDDHSHVSTQVVGTSGYAAPEYVVTGHLYVKSDVYGFGLVLMEILTGKQIGEIMRIGEQTSLCDWLKSNLLNRAKSRSNMDPKLEGKYPPNLASQIAQLALKCIQTEHKIRPSMKEVVETLESIEAANDKPADNRKRTSNSREVQQHGQLDGS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3394 433 MobiDBLite consensus disorder prediction 49 95 - -
Tpr2g3394 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Tpr2g3394 433 SUPERFAMILY Protein kinase-like (PK-like) 104 401 IPR011009 -
Tpr2g3394 433 Gene3D Phosphorylase Kinase; domain 1 107 206 - -
Tpr2g3394 433 Gene3D Transferase(Phosphotransferase) domain 1 208 429 - -
Tpr2g3394 433 MobiDBLite consensus disorder prediction 404 433 - -
Tpr2g3394 433 Pfam Protein tyrosine and serine/threonine kinase 126 401 IPR001245 GO:0004672|GO:0006468
Tpr2g3394 433 MobiDBLite consensus disorder prediction 49 86 - -
Tpr2g3394 433 ProSitePatterns Protein kinases ATP-binding region signature. 129 159 IPR017441 GO:0005524
Tpr2g3394 433 PANTHER OS01G0588500 PROTEIN-RELATED 12 432 - -
Tpr2g3394 433 ProSiteProfiles Protein kinase domain profile. 123 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3394 433 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 12 432 - -
Tpr2g3394 433 MobiDBLite consensus disorder prediction 404 422 - -
Tpr2g3394 433 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3394 Tpr-Chr2 37467511 37471210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3394 68 401 Receptor kinase-like Gene Family AT3G58690 40.882 1.28e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr2g3394 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3394 - - gmx:100813304 612.453